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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823266
Gene symbol: Arx
Gene name: aristaless related homeobox
Probe: MH740 probe 657
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_018148_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_01
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_018148_01
TS23: tarsus Weak Regionally restricted euxassay_018148_01
Specimen euxassay_018148_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_02
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_02
TS23: ovary Weak Regionally restricted euxassay_018148_02
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_018148_02
TS23: tarsus Weak Regionally restricted euxassay_018148_02
Specimen euxassay_018148_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_03
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_03
TS23: ovary Weak Regionally restricted euxassay_018148_03
TS23: tarsus Weak Regionally restricted euxassay_018148_03
Specimen euxassay_018148_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_04
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_04
TS23: ovary Weak Regionally restricted euxassay_018148_04
Specimen euxassay_018148_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_05
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_05
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018148_05
Specimen euxassay_018148_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_06
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_06
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018148_06
Specimen euxassay_018148_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_07
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_07
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_07
TS23: pancreas Strong Spotted euxassay_018148_07
TS23: heart ventricle Moderate Spotted euxassay_018148_07
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018148_07
Specimen euxassay_018148_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_08
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_08
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_08
TS23: spinal cord floor plate Strong Regionally restricted euxassay_018148_08
TS23: pancreas Strong Spotted euxassay_018148_08
TS23: heart ventricle Moderate Spotted euxassay_018148_08
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018148_08
Specimen euxassay_018148_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_09
TS23: olfactory cortex mantle layer Strong Spotted euxassay_018148_09
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_09
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_09 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_09
TS23: spinal cord floor plate Strong Regionally restricted euxassay_018148_09
TS23: heart ventricle Moderate Spotted euxassay_018148_09
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018148_09
Specimen euxassay_018148_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Spotted euxassay_018148_10
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_10
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_10
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_10 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_10
TS23: spinal cord floor plate Strong Regionally restricted euxassay_018148_10
TS23: heart ventricle Moderate Spotted euxassay_018148_10
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018148_10
TS23: tongue muscle Weak Regionally restricted euxassay_018148_10
Specimen euxassay_018148_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Spotted euxassay_018148_11
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_11
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_11
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_11 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_11
TS23: spinal cord floor plate Strong Regionally restricted euxassay_018148_11
TS23: pancreas Strong Spotted euxassay_018148_11
TS23: heart ventricle Moderate Spotted euxassay_018148_11
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018148_11
TS23: tongue muscle Weak Regionally restricted euxassay_018148_11
Specimen euxassay_018148_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_12
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_12
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_12 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_12
TS23: spinal cord floor plate Strong Regionally restricted euxassay_018148_12
TS23: pancreas Strong Spotted euxassay_018148_12
TS23: heart ventricle Moderate Spotted euxassay_018148_12
TS23: tongue muscle Weak Regionally restricted euxassay_018148_12
Specimen euxassay_018148_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_13
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_13
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_13 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_13
TS23: spinal cord floor plate Strong Regionally restricted euxassay_018148_13
TS23: pancreas Strong Spotted euxassay_018148_13
TS23: heart ventricle Moderate Spotted euxassay_018148_13
TS23: tongue muscle Weak Regionally restricted euxassay_018148_13
Specimen euxassay_018148_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Spotted euxassay_018148_14
TS23: cerebral cortex mantle layer Moderate Spotted euxassay_018148_14
TS23: olfactory cortex mantle layer Moderate Spotted euxassay_018148_14
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_14
TS23: spinal cord floor plate Strong Regionally restricted euxassay_018148_14
TS23: pancreas Strong Spotted euxassay_018148_14
TS23: heart ventricle Moderate Spotted euxassay_018148_14
TS23: tongue muscle Weak Regionally restricted euxassay_018148_14
Specimen euxassay_018148_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_15
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_15
TS23: olfactory cortex mantle layer Strong Spotted euxassay_018148_15
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_15 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_15
TS23: diencephalon floor plate Strong Regionally restricted euxassay_018148_15
TS23: midbrain floor plate Strong Regionally restricted euxassay_018148_15
TS23: metencephalon floor plate Strong Regionally restricted euxassay_018148_15
TS23: medulla oblongata floor plate Strong Regionally restricted euxassay_018148_15
TS23: heart ventricle Moderate Spotted euxassay_018148_15
TS23: tongue muscle Weak Regionally restricted euxassay_018148_15
Specimen euxassay_018148_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Spotted euxassay_018148_16
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_16
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_16
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_16 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_16
Specimen euxassay_018148_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_17
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_17
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_17 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_17
TS23: ovary Weak Regionally restricted euxassay_018148_17
TS23: heart ventricle Moderate Spotted euxassay_018148_17
Specimen euxassay_018148_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_18
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_18
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_18 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_18
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_018148_18
TS23: ovary Weak Regionally restricted euxassay_018148_18
TS23: tarsus Weak Regionally restricted euxassay_018148_18
Specimen euxassay_018148_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_19
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_19
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_19
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_19 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_19
TS23: paramesonephric duct of female Moderate Regionally restricted euxassay_018148_19
TS23: ovary Weak Regionally restricted euxassay_018148_19
TS23: tarsus Weak Regionally restricted euxassay_018148_19
Specimen euxassay_018148_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_20
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_20
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_20
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_20 prethalamus
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_018148_20
Specimen euxassay_018148_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_21
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_21
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_21
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_018148_21 prethalamus
Specimen euxassay_018148_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_22
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_22
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_22
Specimen euxassay_018148_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_23
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_23
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_23
Specimen euxassay_018148_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Spotted euxassay_018148_24
TS23: telencephalon mantle layer Strong Spotted euxassay_018148_24
TS23: cerebral cortex mantle layer Strong Spotted euxassay_018148_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory