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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823209
Gene symbol: Arf4
Gene name: ADP-ribosylation factor 4
Probe: IMAGE clone 1066958
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000003_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: arm Strong Regionally restricted euxassay_000003_01
TS23: hindlimb Strong Regionally restricted euxassay_000003_01
TS23: leg Strong Regionally restricted euxassay_000003_01
TS23: limb Strong Regionally restricted euxassay_000003_01
TS23: forelimb Strong Regionally restricted euxassay_000003_01
Specimen euxassay_000003_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea epithelium Moderate Uniform euxassay_000003_02
TS23: cornea stroma Moderate Uniform euxassay_000003_02
TS23: lumbar vertebral cartilage condensation Moderate Uniform euxassay_000003_02
TS23: stomach glandular region epithelium Strong Uniform euxassay_000003_02
TS23: stomach glandular region mesenchyme Strong Uniform euxassay_000003_02
TS23: stomach Strong Uniform euxassay_000003_02
TS23: stomach glandular region mucosa Strong Uniform euxassay_000003_02
TS23: limb Strong Regionally restricted euxassay_000003_02
Specimen euxassay_000003_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea epithelium Moderate Uniform euxassay_000003_03
TS23: cornea stroma Moderate Uniform euxassay_000003_03
TS23: vibrissa dermal component Strong Regionally restricted euxassay_000003_03
TS23: vibrissa epidermal component Strong Regionally restricted euxassay_000003_03
TS23: axial skeleton Strong Regionally restricted euxassay_000003_03
TS23: stomach glandular region epithelium Strong Uniform euxassay_000003_03
TS23: stomach glandular region mesenchyme Strong Uniform euxassay_000003_03
TS23: stomach Strong Uniform euxassay_000003_03
TS23: stomach fundus mesenchyme Strong Uniform euxassay_000003_03
TS23: stomach fundus epithelium Strong Uniform euxassay_000003_03
TS23: limb Strong Regionally restricted euxassay_000003_03
TS23: forelimb Strong Regionally restricted euxassay_000003_03
TS23: hindlimb Strong Regionally restricted euxassay_000003_03
TS23: hand mesenchyme Strong Regionally restricted euxassay_000003_03
TS23: foot mesenchyme Strong Regionally restricted euxassay_000003_03
Specimen euxassay_000003_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa dermal component Strong Regionally restricted euxassay_000003_04
TS23: lower jaw Moderate Regionally restricted euxassay_000003_04
TS23: mandible Moderate Regionally restricted euxassay_000003_04
TS23: stomach fundus epithelium Strong Uniform euxassay_000003_04
TS23: stomach fundus glandular mucous membrane Strong Uniform euxassay_000003_04
TS23: stomach glandular region epithelium Strong Uniform euxassay_000003_04
TS23: stomach glandular region mucosa Strong Uniform euxassay_000003_04
TS23: stomach pyloric region epithelium Strong Uniform euxassay_000003_04
TS23: stomach pyloric region mesenchyme Strong Uniform euxassay_000003_04
TS23: limb Strong Regionally restricted euxassay_000003_04
Specimen euxassay_000003_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa dermal component Strong Regionally restricted euxassay_000003_05
TS23: vibrissa Strong Regionally restricted euxassay_000003_05
TS23: lower jaw Moderate Regionally restricted euxassay_000003_05
TS23: mandible Moderate Regionally restricted euxassay_000003_05
TS23: stomach pyloric region epithelium Strong Uniform euxassay_000003_05
TS23: stomach pyloric region mesenchyme Strong Uniform euxassay_000003_05
TS23: stomach glandular region epithelium Strong Uniform euxassay_000003_05
TS23: stomach glandular region mesenchyme Strong Uniform euxassay_000003_05
TS23: stomach fundus epithelium Strong Uniform euxassay_000003_05
TS23: stomach fundus mesenchyme Strong Uniform euxassay_000003_05
TS23: stomach Strong Uniform euxassay_000003_05
TS23: oral region Moderate Regionally restricted euxassay_000003_05
TS23: skeleton Strong Regionally restricted euxassay_000003_05
TS23: limb Strong Regionally restricted euxassay_000003_05
TS23: hindlimb Strong Regionally restricted euxassay_000003_05
Specimen euxassay_000003_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_000003_06
TS23: skeleton Strong Regionally restricted euxassay_000003_06
TS23: foregut duodenum Strong Uniform euxassay_000003_06
TS23: stomach Strong Uniform euxassay_000003_06
TS23: stomach proventricular region epithelium Strong Uniform euxassay_000003_06
TS23: stomach pyloric region epithelium Strong Uniform euxassay_000003_06
TS23: foregut Strong Regionally restricted euxassay_000003_06
TS23: vibrissa dermal component Strong Regionally restricted euxassay_000003_06
Specimen euxassay_000003_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_000003_07
TS23: vibrissa dermal component Strong Regionally restricted euxassay_000003_07
TS23: foregut-midgut junction duodenum Moderate Uniform euxassay_000003_07
TS23: foregut-midgut junction epithelium Moderate Uniform euxassay_000003_07
TS23: skeleton Strong Regionally restricted euxassay_000003_07 periosteum
TS23: lower jaw Strong Regionally restricted euxassay_000003_07
TS23: lower jaw mesenchyme Strong Regionally restricted euxassay_000003_07
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000003_07
Specimen euxassay_000003_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Strong Regionally restricted euxassay_000003_08 periosteum
TS23: vibrissa Strong Regionally restricted euxassay_000003_08
TS23: vibrissa dermal component Strong Regionally restricted euxassay_000003_08
TS23: oral epithelium Moderate Regionally restricted euxassay_000003_08
TS23: mandible Moderate Regionally restricted euxassay_000003_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_000003_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000003_08
Specimen euxassay_000003_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Spotted euxassay_000003_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000003_09
TS23: mandible Strong Regionally restricted euxassay_000003_09
TS23: skeleton Strong Regionally restricted euxassay_000003_09 periosteum
TS23: vibrissa dermal component Moderate Regionally restricted euxassay_000003_09
TS23: nasal cavity Moderate Regionally restricted euxassay_000003_09
TS23: nose Moderate Regionally restricted euxassay_000003_09
Specimen euxassay_000003_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Regionally restricted euxassay_000003_10
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000003_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000003_10
TS23: nose Moderate Regionally restricted euxassay_000003_10
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_000003_10
TS23: mandible Moderate Regionally restricted euxassay_000003_10
TS23: skeleton Strong Regionally restricted euxassay_000003_10 periosteum
TS23: pons Moderate Uniform euxassay_000003_10
Specimen euxassay_000003_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: facial ganglion Strong Regionally restricted euxassay_000003_11
TS23: skeleton Strong Regionally restricted euxassay_000003_11 periosteum
TS23: axial skeleton Strong Regionally restricted euxassay_000003_11 periosteum
TS23: oculomotor nerve Moderate Uniform euxassay_000003_11
TS23: facial nerve Moderate Uniform euxassay_000003_11
TS23: pons Moderate Uniform euxassay_000003_11 reticular nucleus
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_000003_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000003_11
TS23: nasal septum epithelium Moderate Regionally restricted euxassay_000003_11
Specimen euxassay_000003_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: facial ganglion Strong Spotted euxassay_000003_12
TS23: clavicle Moderate Uniform euxassay_000003_12 periosteum
TS23: thoracic segment skeleton Moderate Uniform euxassay_000003_12 periosteum
TS23: pons Strong Uniform euxassay_000003_12 reticular nucleus
TS23: trigeminal nerve Moderate Uniform euxassay_000003_12
TS23: facial nerve Moderate Uniform euxassay_000003_12
TS23: tail vertebral cartilage condensation Strong Uniform euxassay_000003_12
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_000003_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000003_12
TS23: nasal septum Moderate Regionally restricted euxassay_000003_12
TS23: nasal septum epithelium Moderate Regionally restricted euxassay_000003_12
Specimen euxassay_000003_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tail vertebral cartilage condensation Strong Uniform euxassay_000003_13
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_000003_13
TS23: nasal cavity Moderate Regionally restricted euxassay_000003_13
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_000003_13
TS23: nasal septum Moderate Regionally restricted euxassay_000003_13
TS23: nasal septum epithelium Moderate Regionally restricted euxassay_000003_13
Specimen euxassay_000003_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic intervertebral disc Moderate Uniform euxassay_000003_14
TS23: tail vertebral cartilage condensation Moderate Regionally restricted euxassay_000003_14
TS23: lower jaw mesenchyme Moderate Regionally restricted euxassay_000003_14
TS23: hypoglossal nerve Strong Regionally restricted euxassay_000003_14
TS23: vagus ganglion Strong Regionally restricted euxassay_000003_14
TS23: spinal cord Strong Regionally restricted euxassay_000003_14
TS23: nasal cavity Weak Regionally restricted euxassay_000003_14
TS23: nasal cavity epithelium Weak Regionally restricted euxassay_000003_14
TS23: nasal septum Weak Regionally restricted euxassay_000003_14
TS23: nasal septum epithelium Weak Regionally restricted euxassay_000003_14
TS23: basal columns Strong Regionally restricted euxassay_000003_14
Specimen euxassay_000003_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal cavity Strong Regionally restricted euxassay_000003_15
TS23: nasal cavity epithelium Strong Regionally restricted euxassay_000003_15
TS23: nasal septum Strong Regionally restricted euxassay_000003_15
TS23: nasal capsule Strong Regionally restricted euxassay_000003_15
TS23: tail vertebral cartilage condensation Strong Uniform euxassay_000003_15
TS23: axial skeleton Strong Uniform euxassay_000003_15
TS23: thoracic intervertebral disc Strong Uniform euxassay_000003_15
TS23: metencephalon floor plate Strong Regionally restricted euxassay_000003_15
TS23: medulla oblongata floor plate Strong Regionally restricted euxassay_000003_15
TS23: spinal cord Strong Regionally restricted euxassay_000003_15
TS23: spinal cord floor plate Strong Regionally restricted euxassay_000003_15
Specimen euxassay_000003_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal capsule Strong Regionally restricted euxassay_000003_16
TS23: nasal cavity Strong Regionally restricted euxassay_000003_16
TS23: nasal cavity epithelium Strong Regionally restricted euxassay_000003_16
TS23: nasal septum Strong Regionally restricted euxassay_000003_16
TS23: nasal septum epithelium Strong Regionally restricted euxassay_000003_16
TS23: tail skeleton Strong Regionally restricted euxassay_000003_16
TS23: axial skeleton tail region Strong Regionally restricted euxassay_000003_16
TS23: tail vertebral cartilage condensation Strong Regionally restricted euxassay_000003_16
TS23: thoracic intervertebral disc Strong Regionally restricted euxassay_000003_16
TS23: medullary raphe Strong Regionally restricted euxassay_000003_16
TS23: basal columns Strong Regionally restricted euxassay_000003_16
Specimen euxassay_000003_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medullary raphe Strong Regionally restricted euxassay_000003_17
TS23: tail vertebral cartilage condensation Strong Uniform euxassay_000003_17
TS23: axial skeleton tail region Strong Uniform euxassay_000003_17
TS23: axial skeleton Strong Uniform euxassay_000003_17
TS23: cervical intervertebral disc Strong Uniform euxassay_000003_17
TS23: lumbar intervertebral disc Strong Uniform euxassay_000003_17
TS23: thoracic intervertebral disc Strong Uniform euxassay_000003_17
TS23: skeleton Strong Regionally restricted euxassay_000003_17 periosteum
TS23: nose Moderate Regionally restricted euxassay_000003_17
TS23: external naris epithelium Moderate Regionally restricted euxassay_000003_17
TS23: nasal capsule Moderate Regionally restricted euxassay_000003_17
TS23: nasal cavity Moderate Regionally restricted euxassay_000003_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_000003_17
TS23: nasal cavity epithelium Moderate Regionally restricted euxassay_000003_17
TS23: basal columns Strong Regionally restricted euxassay_000003_17
Specimen euxassay_000003_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: clavicle Strong Regionally restricted euxassay_000003_18
TS23: nasal cavity Strong Regionally restricted euxassay_000003_18
TS23: nasal cavity epithelium Strong Regionally restricted euxassay_000003_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_000003_18
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000003_18
TS23: anterior naris epithelium Strong Regionally restricted euxassay_000003_18
TS23: axial skeleton Moderate Regionally restricted euxassay_000003_18
TS23: cervical intervertebral disc Moderate Regionally restricted euxassay_000003_18
TS23: thoracic intervertebral disc Moderate Regionally restricted euxassay_000003_18
TS23: basal columns Strong Regionally restricted euxassay_000003_18
TS23: nasal capsule Strong Regionally restricted euxassay_000003_18
TS23: facial nerve Strong Regionally restricted euxassay_000003_18
TS23: medullary raphe Strong Regionally restricted euxassay_000003_18
TS23: trigeminal nerve Weak Regionally restricted euxassay_000003_18
TS23: mandible Strong Regionally restricted euxassay_000003_18
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_000003_18
Specimen euxassay_000003_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial nerve Strong Regionally restricted euxassay_000003_19
TS23: trigeminal nerve Strong Regionally restricted euxassay_000003_19
TS23: basal columns Strong Regionally restricted euxassay_000003_19
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000003_19
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_000003_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000003_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000003_19
TS23: clavicle Strong Regionally restricted euxassay_000003_19
TS23: nasal cavity Strong Regionally restricted euxassay_000003_19
TS23: lower jaw skeleton Strong Regionally restricted euxassay_000003_19
TS23: diaphragm Strong Regionally restricted euxassay_000003_19
Specimen euxassay_000003_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_000003_20
TS23: turbinate bone primordium Strong Regionally restricted euxassay_000003_20
TS23: nasal cavity Strong Regionally restricted euxassay_000003_20
TS23: vibrissa Strong Regionally restricted euxassay_000003_20
TS23: lower jaw skeleton Strong Regionally restricted euxassay_000003_20
TS23: clavicle Strong Regionally restricted euxassay_000003_20
TS23: axial skeleton Strong Regionally restricted euxassay_000003_20
TS23: diaphragm Strong Regionally restricted euxassay_000003_20
Specimen euxassay_000003_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_000003_21
TS23: nasal cavity Strong Regionally restricted euxassay_000003_21
TS23: vibrissa Strong Regionally restricted euxassay_000003_21
TS23: lower jaw skeleton Strong Regionally restricted euxassay_000003_21
TS23: axial skeleton Strong Regionally restricted euxassay_000003_21
TS23: femur Strong Regionally restricted euxassay_000003_21
Specimen euxassay_000003_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_000003_22
TS23: vibrissa Strong Regionally restricted euxassay_000003_22
TS23: lower jaw skeleton Strong Regionally restricted euxassay_000003_22
TS23: diaphragm Strong Regionally restricted euxassay_000003_22
TS23: femur Strong Regionally restricted euxassay_000003_22
Specimen euxassay_000003_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_000003_23
TS23: nasal cavity Strong Regionally restricted euxassay_000003_23
TS23: lower jaw skeleton Moderate Regionally restricted euxassay_000003_23
TS23: axial skeleton Strong Regionally restricted euxassay_000003_23
TS23: femur Moderate Regionally restricted euxassay_000003_23
Specimen euxassay_000003_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_000003_24
TS23: axial skeleton Strong Regionally restricted euxassay_000003_24
TS23: neural retina Moderate Regionally restricted euxassay_000003_24
TS23: lower jaw skeleton Moderate Regionally restricted euxassay_000003_24
TS23: frontal bone primordium Strong Regionally restricted euxassay_000003_24
TS23: tibia Moderate Regionally restricted euxassay_000003_24
TS23: femur Moderate Regionally restricted euxassay_000003_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory