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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823085
Gene symbol: Aldh6a1
Gene name: aldehyde dehydrogenase family 6, subfamily A1
Probe: T31399
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012513_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_02
Specimen euxassay_012513_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_03
Specimen euxassay_012513_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_04
Specimen euxassay_012513_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_05
Specimen euxassay_012513_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_06
TS23: choroid invagination Weak Regionally restricted euxassay_012513_06
TS23: pons ventricular layer Weak Regionally restricted euxassay_012513_06
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_012513_06
TS23: otic capsule Moderate Regionally restricted euxassay_012513_06
Specimen euxassay_012513_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_07
TS23: choroid invagination Weak Regionally restricted euxassay_012513_07
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012513_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_07
TS23: turbinate bone primordium Weak Regionally restricted euxassay_012513_07
TS23: otic capsule Moderate Regionally restricted euxassay_012513_07
Specimen euxassay_012513_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Weak Regionally restricted euxassay_012513_08
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_012513_08
TS23: otic capsule Weak Regionally restricted euxassay_012513_08
Specimen euxassay_012513_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Weak Regionally restricted euxassay_012513_09
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_09
TS23: olfactory cortex ventricular layer Weak Regionally restricted euxassay_012513_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_012513_09
TS23: otic capsule Weak Regionally restricted euxassay_012513_09
Specimen euxassay_012513_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_10
TS23: olfactory cortex ventricular layer Weak Regionally restricted euxassay_012513_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012513_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_012513_10
Specimen euxassay_012513_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012513_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012513_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_11
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012513_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012513_11
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012513_11
TS23: naris Moderate Regionally restricted euxassay_012513_11
Specimen euxassay_012513_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012513_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012513_12
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012513_12
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012513_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_12
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012513_12
TS23: naris Moderate Regionally restricted euxassay_012513_12
TS23: nasal septum Moderate Regionally restricted euxassay_012513_12
Specimen euxassay_012513_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012513_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_13
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012513_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012513_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012513_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_13
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012513_13
TS23: naris Moderate Regionally restricted euxassay_012513_13
Specimen euxassay_012513_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_14
TS23: olfactory cortex ventricular layer Weak Regionally restricted euxassay_012513_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012513_14
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012513_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012513_14
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012513_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_14
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012513_14
TS23: naris Moderate Regionally restricted euxassay_012513_14
Specimen euxassay_012513_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Weak Regionally restricted euxassay_012513_15
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_15
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012513_15
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012513_15
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012513_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_15
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012513_15
TS23: naris Moderate Regionally restricted euxassay_012513_15
Specimen euxassay_012513_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_16
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012513_16
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012513_16
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012513_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_16
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_012513_16
Specimen euxassay_012513_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_17
TS23: choroid invagination Weak Regionally restricted euxassay_012513_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012513_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_17
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012513_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_012513_17
TS23: otic capsule Moderate Regionally restricted euxassay_012513_17
Specimen euxassay_012513_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_18
TS23: choroid invagination Weak Regionally restricted euxassay_012513_18
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012513_18
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_012513_18
TS23: otic capsule Moderate Regionally restricted euxassay_012513_18
Specimen euxassay_012513_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_19
TS23: choroid invagination Weak Regionally restricted euxassay_012513_19
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012513_19
TS23: otic capsule Moderate Regionally restricted euxassay_012513_19
Specimen euxassay_012513_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_20
TS23: pons ventricular layer Weak Regionally restricted euxassay_012513_20
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_012513_20
TS23: otic capsule Moderate Regionally restricted euxassay_012513_20
Specimen euxassay_012513_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_21
TS23: pons ventricular layer Weak Regionally restricted euxassay_012513_21
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_012513_21
Specimen euxassay_012513_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_22
Specimen euxassay_012513_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012513_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory