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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822944
Gene symbol: Acsl5
Gene name: acyl-CoA synthetase long-chain family member 5
Probe: T50063
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_018902_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_01
TS23: stomach Moderate Regionally restricted euxassay_018902_01
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_018902_01
Specimen euxassay_018902_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_02
TS23: stomach Moderate Regionally restricted euxassay_018902_02
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_02
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_02
Specimen euxassay_018902_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_03
TS23: stomach Moderate Regionally restricted euxassay_018902_03
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_03
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_03
Specimen euxassay_018902_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_04
TS23: mandible Weak Regionally restricted euxassay_018902_04
TS23: stomach Moderate Regionally restricted euxassay_018902_04
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_04
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_04
Specimen euxassay_018902_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_05
TS23: lung Moderate Regionally restricted euxassay_018902_05
TS23: mandible Weak Regionally restricted euxassay_018902_05
TS23: vibrissa Weak Regionally restricted euxassay_018902_05
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_05
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_05
Specimen euxassay_018902_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_06
TS23: lung Strong Regionally restricted euxassay_018902_06
TS23: mandible Weak Regionally restricted euxassay_018902_06
TS23: maxilla Weak Regionally restricted euxassay_018902_06
TS23: stomach Moderate Regionally restricted euxassay_018902_06
TS23: midgut Strong Regionally restricted euxassay_018902_06
TS23: vibrissa Weak Regionally restricted euxassay_018902_06
TS23: axial musculature Weak Regionally restricted euxassay_018902_06
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_06
Specimen euxassay_018902_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_07
TS23: lung Strong Regionally restricted euxassay_018902_07
TS23: mandible Weak Regionally restricted euxassay_018902_07
TS23: midgut Strong Regionally restricted euxassay_018902_07
TS23: stomach Moderate Regionally restricted euxassay_018902_07
TS23: metanephros Weak Regionally restricted euxassay_018902_07
TS23: vibrissa Weak Regionally restricted euxassay_018902_07
TS23: axial musculature Weak Regionally restricted euxassay_018902_07
Specimen euxassay_018902_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_08
TS23: lung Strong Regionally restricted euxassay_018902_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_08
TS23: mandible Weak Regionally restricted euxassay_018902_08
TS23: stomach Moderate Regionally restricted euxassay_018902_08
TS23: midgut Strong Regionally restricted euxassay_018902_08
TS23: metanephros Weak Regionally restricted euxassay_018902_08
TS23: pons mantle layer Weak Regionally restricted euxassay_018902_08 trigeminal motor nucleus
Specimen euxassay_018902_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_09
TS23: lung Strong Regionally restricted euxassay_018902_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_018902_09
TS23: maxilla Weak Regionally restricted euxassay_018902_09
TS23: mandible Weak Regionally restricted euxassay_018902_09
TS23: midgut Strong Regionally restricted euxassay_018902_09
TS23: stomach Moderate Regionally restricted euxassay_018902_09
TS23: metanephros Weak Regionally restricted euxassay_018902_09
TS23: adrenal gland Moderate Regionally restricted euxassay_018902_09
TS23: pancreas Moderate Regionally restricted euxassay_018902_09
Specimen euxassay_018902_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_10
TS23: lung Strong Regionally restricted euxassay_018902_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_018902_10
TS23: maxilla Weak Regionally restricted euxassay_018902_10
TS23: mandible Weak Regionally restricted euxassay_018902_10
TS23: stomach Moderate Regionally restricted euxassay_018902_10
TS23: midgut Strong Regionally restricted euxassay_018902_10
TS23: metanephros Weak Regionally restricted euxassay_018902_10
TS23: adrenal gland Moderate Regionally restricted euxassay_018902_10
TS23: pancreas Moderate Regionally restricted euxassay_018902_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018902_10 facial motor nucleus
Specimen euxassay_018902_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_11
TS23: lung Strong Regionally restricted euxassay_018902_11
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_11
TS23: midgut Strong Regionally restricted euxassay_018902_11
TS23: metanephros Weak Regionally restricted euxassay_018902_11
TS23: adrenal gland Moderate Regionally restricted euxassay_018902_11
TS23: pancreas Moderate Regionally restricted euxassay_018902_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018902_11 facial motor nucleus
TS23: cervical ganglion Weak Regionally restricted euxassay_018902_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_11
Specimen euxassay_018902_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_12
TS23: thyroid gland Weak Regionally restricted euxassay_018902_12
TS23: lung Strong Regionally restricted euxassay_018902_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_12
TS23: vomeronasal organ Moderate Regionally restricted euxassay_018902_12
TS23: midgut Strong Regionally restricted euxassay_018902_12
TS23: hindgut Strong Regionally restricted euxassay_018902_12
TS23: metanephros Weak Regionally restricted euxassay_018902_12
TS23: pancreas Moderate Regionally restricted euxassay_018902_12
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_018902_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_12
Specimen euxassay_018902_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_13
TS23: thymus primordium Strong Regionally restricted euxassay_018902_13
TS23: thyroid gland Moderate Regionally restricted euxassay_018902_13
TS23: bladder Strong Regionally restricted euxassay_018902_13
TS23: urethra Moderate Regionally restricted euxassay_018902_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: lung Strong Regionally restricted euxassay_018902_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_13
TS23: vomeronasal organ Moderate Regionally restricted euxassay_018902_13
TS23: mandible Weak Regionally restricted euxassay_018902_13
TS23: midgut Strong Regionally restricted euxassay_018902_13
TS23: hindgut Strong Regionally restricted euxassay_018902_13
TS23: pancreas Moderate Regionally restricted euxassay_018902_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_018902_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_13
Specimen euxassay_018902_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_14
TS23: thymus primordium Strong Regionally restricted euxassay_018902_14
TS23: bladder Strong Regionally restricted euxassay_018902_14
TS23: urethra Moderate Regionally restricted euxassay_018902_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: lung Strong Regionally restricted euxassay_018902_14
TS23: midgut Strong Regionally restricted euxassay_018902_14
TS23: hindgut Strong Regionally restricted euxassay_018902_14
TS23: larynx Moderate Regionally restricted euxassay_018902_14
TS23: esophagus Moderate Regionally restricted euxassay_018902_14
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_14
TS23: thoracic ganglion Weak Regionally restricted euxassay_018902_14
Specimen euxassay_018902_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_15
TS23: thymus primordium Strong Regionally restricted euxassay_018902_15
TS23: bladder Strong Regionally restricted euxassay_018902_15
TS23: lung Moderate Regionally restricted euxassay_018902_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_15
TS23: midgut Strong Regionally restricted euxassay_018902_15
TS23: hindgut Strong Regionally restricted euxassay_018902_15
TS23: larynx Moderate Regionally restricted euxassay_018902_15
TS23: trachea Moderate Regionally restricted euxassay_018902_15
TS23: esophagus Moderate Regionally restricted euxassay_018902_15
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_15
TS23: thoracic ganglion Weak Regionally restricted euxassay_018902_15
Specimen euxassay_018902_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_16
TS23: thymus primordium Strong Regionally restricted euxassay_018902_16
TS23: lung Strong Regionally restricted euxassay_018902_16
TS23: vomeronasal organ Weak Regionally restricted euxassay_018902_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_018902_16
TS23: midgut Strong Regionally restricted euxassay_018902_16
TS23: pancreas Moderate Regionally restricted euxassay_018902_16
TS23: larynx Moderate Regionally restricted euxassay_018902_16
TS23: trachea Weak Regionally restricted euxassay_018902_16
TS23: esophagus Moderate Regionally restricted euxassay_018902_16
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_16
Specimen euxassay_018902_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_17
TS23: thymus primordium Strong Regionally restricted euxassay_018902_17
TS23: thyroid gland Moderate Regionally restricted euxassay_018902_17
TS23: lung Strong Regionally restricted euxassay_018902_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_17
TS23: midgut Strong Regionally restricted euxassay_018902_17
TS23: pancreas Weak Regionally restricted euxassay_018902_17
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_17
Specimen euxassay_018902_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_18
TS23: thyroid gland Weak Regionally restricted euxassay_018902_18
TS23: lung Strong Regionally restricted euxassay_018902_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_018902_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_18
TS23: metanephros Weak Regionally restricted euxassay_018902_18
TS23: adrenal gland Weak Regionally restricted euxassay_018902_18
TS23: pancreas Weak Regionally restricted euxassay_018902_18
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018902_18 facial motor nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_18
Specimen euxassay_018902_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_19
TS23: lung Strong Regionally restricted euxassay_018902_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_19
TS23: maxilla Weak Regionally restricted euxassay_018902_19
TS23: mandible Weak Regionally restricted euxassay_018902_19
TS23: adrenal gland Weak Regionally restricted euxassay_018902_19
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018902_19 facial motor nucleus
TS23: pons mantle layer Weak Regionally restricted euxassay_018902_19 trigeminal motor nucleus
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_018902_19
TS23: cervical ganglion Weak Regionally restricted euxassay_018902_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_19
Specimen euxassay_018902_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_20
TS23: lung Strong Regionally restricted euxassay_018902_20
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_20
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_20
TS23: mandible Weak Regionally restricted euxassay_018902_20
TS23: maxilla Weak Regionally restricted euxassay_018902_20
TS23: adrenal gland Weak Regionally restricted euxassay_018902_20
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_20
Specimen euxassay_018902_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_21
TS23: lung Strong Regionally restricted euxassay_018902_21
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_21
TS23: maxilla Weak Regionally restricted euxassay_018902_21
TS23: mandible Weak Regionally restricted euxassay_018902_21
TS23: metanephros Weak Regionally restricted euxassay_018902_21
TS23: adrenal gland Weak Regionally restricted euxassay_018902_21
TS23: vibrissa Weak Regionally restricted euxassay_018902_21
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_21
Specimen euxassay_018902_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_22
TS23: lung Strong Regionally restricted euxassay_018902_22
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_22
TS23: mandible Weak Regionally restricted euxassay_018902_22
TS23: maxilla Weak Regionally restricted euxassay_018902_22
TS23: metanephros Weak Regionally restricted euxassay_018902_22
TS23: vibrissa Weak Regionally restricted euxassay_018902_22
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_22
Specimen euxassay_018902_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_23
TS23: lung Strong Regionally restricted euxassay_018902_23
TS23: mandible Weak Regionally restricted euxassay_018902_23
TS23: metanephros Weak Regionally restricted euxassay_018902_23
TS23: vibrissa Weak Regionally restricted euxassay_018902_23
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_23
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_23
Specimen euxassay_018902_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_24
TS23: lung Strong Regionally restricted euxassay_018902_24
TS23: mandible Weak Regionally restricted euxassay_018902_24
TS23: axial musculature Weak Regionally restricted euxassay_018902_24
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory