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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822859
Gene symbol: Abca1
Gene name: ATP-binding cassette, sub-family A member 1
Probe: T35855
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009354_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_02
Specimen euxassay_009354_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_03
Specimen euxassay_009354_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_04
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_04
Specimen euxassay_009354_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_05
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_05
Specimen euxassay_009354_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_06
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_06
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_06
Specimen euxassay_009354_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_07
TS23: pons ventricular layer Strong Regionally restricted euxassay_009354_07
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_07
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_07
Specimen euxassay_009354_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_08
TS23: spinal cord Moderate Single cells euxassay_009354_08
TS23: pons ventricular layer Strong Regionally restricted euxassay_009354_08
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_08
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_08
Specimen euxassay_009354_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_09
TS23: spinal cord Moderate Single cells euxassay_009354_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_09
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_09
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_09
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_009354_09
Specimen euxassay_009354_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_10
TS23: spinal cord Moderate Single cells euxassay_009354_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_10
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009354_10
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_009354_10
Specimen euxassay_009354_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_11
TS23: spinal cord Moderate Single cells euxassay_009354_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009354_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_11
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_11
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_009354_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009354_11
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_009354_11
Specimen euxassay_009354_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_12
TS23: spinal cord Moderate Single cells euxassay_009354_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_009354_12
Specimen euxassay_009354_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_13
TS23: spinal cord Moderate Single cells euxassay_009354_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009354_13
Specimen euxassay_009354_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_14
TS23: spinal cord Moderate Single cells euxassay_009354_14
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_009354_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_14
Specimen euxassay_009354_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_15
TS23: spinal cord Moderate Single cells euxassay_009354_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_15
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_15
Specimen euxassay_009354_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_16
TS23: spinal cord Moderate Single cells euxassay_009354_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_16
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_16
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_16
Specimen euxassay_009354_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_17
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_17
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_17
Specimen euxassay_009354_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_18
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_18
Specimen euxassay_009354_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_19
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_19
Specimen euxassay_009354_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_20
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_20
Specimen euxassay_009354_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_21
Specimen euxassay_009354_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory