About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822859
Gene symbol: Abca1
Gene name: ATP-binding cassette, sub-family A member 1
Probe: T35855
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009354_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_02
Specimen euxassay_009354_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_03
Specimen euxassay_009354_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_04
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_04
Specimen euxassay_009354_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_05
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_05
Specimen euxassay_009354_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_06
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_06
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_06
Specimen euxassay_009354_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_07
TS23: pons ventricular layer Strong Regionally restricted euxassay_009354_07
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_07
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_07
Specimen euxassay_009354_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_08
TS23: spinal cord Moderate Single cells euxassay_009354_08
TS23: pons ventricular layer Strong Regionally restricted euxassay_009354_08
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_08
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_08
Specimen euxassay_009354_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_09
TS23: spinal cord Moderate Single cells euxassay_009354_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_09
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_09
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_09
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_009354_09
Specimen euxassay_009354_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_10
TS23: spinal cord Moderate Single cells euxassay_009354_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_10
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009354_10
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_009354_10
Specimen euxassay_009354_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_11
TS23: spinal cord Moderate Single cells euxassay_009354_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009354_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_11
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_11
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_009354_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009354_11
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_009354_11
Specimen euxassay_009354_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_12
TS23: spinal cord Moderate Single cells euxassay_009354_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009354_12
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_009354_12
Specimen euxassay_009354_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_13
TS23: spinal cord Moderate Single cells euxassay_009354_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009354_13
Specimen euxassay_009354_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_14
TS23: spinal cord Moderate Single cells euxassay_009354_14
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_009354_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_14
Specimen euxassay_009354_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_15
TS23: spinal cord Moderate Single cells euxassay_009354_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_15
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_15
Specimen euxassay_009354_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_16
TS23: spinal cord Moderate Single cells euxassay_009354_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_16
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_16
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009354_16
Specimen euxassay_009354_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_17
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_009354_17
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_009354_17
Specimen euxassay_009354_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_18
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_18
Specimen euxassay_009354_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_19
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_19
Specimen euxassay_009354_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_20
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_009354_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_009354_20
Specimen euxassay_009354_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_21
Specimen euxassay_009354_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Single cells euxassay_009354_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory