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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822784
Gene symbol: Nyap1
Gene name: neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
Probe: IMAGE clone 805332
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000107_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Strong Regionally restricted euxassay_000107_01
Specimen euxassay_000107_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_02
TS23: neural retina Strong Uniform euxassay_000107_02
TS23: retina nuclear layer Strong Uniform euxassay_000107_02
Specimen euxassay_000107_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: retina nuclear layer Strong Uniform euxassay_000107_03
TS23: neural retina Strong Uniform euxassay_000107_03
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_03
Specimen euxassay_000107_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_04
TS23: neural retina Strong Uniform euxassay_000107_04
TS23: retina nuclear layer Strong Uniform euxassay_000107_04
Specimen euxassay_000107_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_05
TS23: neural retina Strong Uniform euxassay_000107_05
TS23: retina nuclear layer Strong Uniform euxassay_000107_05
TS23: trigeminal ganglion Strong Uniform euxassay_000107_05
Specimen euxassay_000107_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000107_06
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_06
Specimen euxassay_000107_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_07
TS23: trigeminal ganglion Strong Uniform euxassay_000107_07
Specimen euxassay_000107_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Uniform euxassay_000107_08
TS23: trigeminal ganglion Strong Uniform euxassay_000107_08
TS23: glossopharyngeal ganglion Strong Uniform euxassay_000107_08
TS23: central nervous system Strong Uniform euxassay_000107_08
Specimen euxassay_000107_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_09
TS23: central nervous system Moderate Uniform euxassay_000107_09
TS23: brain Moderate Uniform euxassay_000107_09
TS23: facial ganglion Strong Uniform euxassay_000107_09
TS23: trigeminal ganglion Strong Uniform euxassay_000107_09
TS23: vagus ganglion Strong Uniform euxassay_000107_09
TS23: vestibulo-cochlear ganglion Strong Uniform euxassay_000107_09
Specimen euxassay_000107_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Uniform euxassay_000107_10
TS23: glossopharyngeal ganglion Strong Uniform euxassay_000107_10
TS23: trigeminal ganglion Strong Uniform euxassay_000107_10
TS23: vagus ganglion Strong Uniform euxassay_000107_10
TS23: vestibulo-cochlear ganglion Strong Uniform euxassay_000107_10
TS23: dorsal root ganglion Strong Uniform euxassay_000107_10
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_10
TS23: brain Moderate Uniform euxassay_000107_10
TS23: midbrain marginal layer Moderate Uniform euxassay_000107_10
Specimen euxassay_000107_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain marginal layer Strong Uniform euxassay_000107_11
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_11
TS23: brain Moderate Uniform euxassay_000107_11
TS23: trigeminal ganglion Moderate Uniform euxassay_000107_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000107_11
Specimen euxassay_000107_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_12
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000107_12
TS23: midbrain marginal layer Strong Uniform euxassay_000107_12
TS23: hindbrain Moderate Uniform euxassay_000107_12
TS23: midbrain Strong Uniform euxassay_000107_12
TS23: inferior colliculus Present euxassay_000107_12
TS23: diencephalon Strong Regionally restricted euxassay_000107_12
TS23: telencephalon Moderate Uniform euxassay_000107_12
TS23: spinal ganglion Moderate Uniform euxassay_000107_12
TS23: dorsal root ganglion Moderate Uniform euxassay_000107_12
TS23: trigeminal ganglion Moderate Uniform euxassay_000107_12
Specimen euxassay_000107_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Uniform euxassay_000107_13
TS23: midbrain marginal layer Strong Uniform euxassay_000107_13
TS23: hindbrain Strong Uniform euxassay_000107_13
TS23: cerebellum Strong Uniform euxassay_000107_13
TS23: metencephalon basal plate Strong Uniform euxassay_000107_13
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000107_13
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_13
Specimen euxassay_000107_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon Moderate Regionally restricted euxassay_000107_14
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_14
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000107_14
TS23: cerebellum Moderate Regionally restricted euxassay_000107_14
TS23: midbrain marginal layer Strong Uniform euxassay_000107_14
TS23: dorsal root ganglion Moderate Uniform euxassay_000107_14
TS23: spinal cord Moderate Uniform euxassay_000107_14
Specimen euxassay_000107_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_15
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000107_15
TS23: midbrain marginal layer Strong Uniform euxassay_000107_15
TS23: midbrain tegmentum Strong Uniform euxassay_000107_15
TS23: cerebellum Weak Regionally restricted euxassay_000107_15
TS23: spinal cord Moderate Uniform euxassay_000107_15
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000107_15
TS23: nucleus pulposus Moderate Regionally restricted euxassay_000107_15
Specimen euxassay_000107_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nucleus pulposus Strong Regionally restricted euxassay_000107_16
TS23: spinal cord Moderate Uniform euxassay_000107_16
TS23: midbrain marginal layer Strong Regionally restricted euxassay_000107_16
TS23: cerebellum Strong Regionally restricted euxassay_000107_16
TS23: metencephalon sulcus limitans Strong Regionally restricted euxassay_000107_16
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_000107_16
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_000107_16
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_000107_16
TS23: diencephalon Strong Regionally restricted euxassay_000107_16
Specimen euxassay_000107_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_17
TS23: telencephalon septum Present euxassay_000107_17
TS23: hindbrain Moderate Regionally restricted euxassay_000107_17
TS23: midbrain marginal layer Strong Uniform euxassay_000107_17
TS23: spinal cord Moderate Regionally restricted euxassay_000107_17
TS23: spinal cord lateral wall Strong Uniform euxassay_000107_17
TS23: spinal cord sulcus limitans Strong Uniform euxassay_000107_17
Specimen euxassay_000107_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Regionally restricted euxassay_000107_18
TS23: midbrain marginal layer Strong Uniform euxassay_000107_18
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_000107_18
TS23: metencephalon alar plate Moderate Regionally restricted euxassay_000107_18
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000107_18
TS23: telencephalon marginal layer Strong Uniform euxassay_000107_18
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_18
Specimen euxassay_000107_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_19
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000107_19
TS23: midbrain marginal layer Strong Uniform euxassay_000107_19
TS23: dorsal root ganglion Moderate Uniform euxassay_000107_19
Specimen euxassay_000107_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Uniform euxassay_000107_20
TS23: midbrain marginal layer Strong Uniform euxassay_000107_20
TS23: cerebellum Moderate Regionally restricted euxassay_000107_20
TS23: metencephalon sulcus limitans Moderate Regionally restricted euxassay_000107_20
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_000107_20
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_000107_20
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_000107_20
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_000107_20
TS23: vestibulo-cochlear ganglion Weak Uniform euxassay_000107_20
TS23: vagus ganglion Weak Uniform euxassay_000107_20
TS23: trigeminal ganglion Weak Uniform euxassay_000107_20
Specimen euxassay_000107_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000107_21
TS23: facial ganglion Moderate Regionally restricted euxassay_000107_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000107_21
TS23: vagus ganglion Moderate Regionally restricted euxassay_000107_21
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_000107_21
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_000107_21
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_000107_21
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000107_21
TS23: cerebellum Moderate Regionally restricted euxassay_000107_21
TS23: rest of cerebellum Moderate Regionally restricted euxassay_000107_21
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_000107_21
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000107_21
TS23: telencephalon marginal layer Strong Uniform euxassay_000107_21
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_21
Specimen euxassay_000107_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_000107_22
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_22
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000107_22
TS23: metencephalon lateral wall Moderate Uniform euxassay_000107_22
TS23: cerebellum Moderate Uniform euxassay_000107_22
TS23: metencephalon basal plate Moderate Uniform euxassay_000107_22
TS23: midbrain lateral wall Moderate Uniform euxassay_000107_22
TS23: midbrain mantle layer Moderate Uniform euxassay_000107_22
TS23: midbrain marginal layer Moderate Uniform euxassay_000107_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_000107_22
TS23: vagus ganglion Strong Regionally restricted euxassay_000107_22
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_000107_22
Specimen euxassay_000107_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_000107_23
TS23: cerebral cortex Strong Uniform euxassay_000107_23
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_23
TS23: corpus striatum Moderate Regionally restricted euxassay_000107_23
TS23: metencephalon rest of alar plate Moderate Regionally restricted euxassay_000107_23
Specimen euxassay_000107_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_000107_24
TS23: corpus striatum Moderate Regionally restricted euxassay_000107_24
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000107_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory