About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822640
Gene symbol: Shisal1
Gene name: shisa like 1
Probe: T35014
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006325_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006325_01
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_01
Specimen euxassay_006325_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006325_02
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_02
Specimen euxassay_006325_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_03
TS23: neural retina Weak Regionally restricted euxassay_006325_03
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_03
Specimen euxassay_006325_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_04
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_04
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_04
Specimen euxassay_006325_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_05
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_05
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_05
Specimen euxassay_006325_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006325_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_06
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_06
TS23: midbrain mantle layer Weak Single cells euxassay_006325_06
Specimen euxassay_006325_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006325_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006325_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_07
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_07
TS23: midbrain mantle layer Weak Single cells euxassay_006325_07
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006325_07
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_07
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006325_07
Specimen euxassay_006325_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006325_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_08
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_08
TS23: midbrain mantle layer Weak Single cells euxassay_006325_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_08
TS23: metencephalon lateral wall Weak Regionally restricted euxassay_006325_08
Specimen euxassay_006325_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_006325_09
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_09
TS23: midbrain mantle layer Weak Single cells euxassay_006325_09
TS23: metencephalon lateral wall Weak Regionally restricted euxassay_006325_09
Specimen euxassay_006325_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_006325_10
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_10
TS23: midbrain mantle layer Weak Single cells euxassay_006325_10
Specimen euxassay_006325_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_11
TS23: midbrain mantle layer Weak Single cells euxassay_006325_11
Specimen euxassay_006325_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_12
Specimen euxassay_006325_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_13
TS23: midbrain mantle layer Weak Single cells euxassay_006325_13
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_13
Specimen euxassay_006325_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_14
TS23: midbrain mantle layer Weak Single cells euxassay_006325_14
Specimen euxassay_006325_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_15
TS23: midbrain mantle layer Weak Single cells euxassay_006325_15
TS23: medulla oblongata lateral wall Weak Regionally restricted euxassay_006325_15
Specimen euxassay_006325_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_006325_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_16
TS23: midbrain mantle layer Weak Single cells euxassay_006325_16
Specimen euxassay_006325_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006325_17
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006325_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_17
TS23: midbrain mantle layer Weak Single cells euxassay_006325_17
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_17
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006325_17
Specimen euxassay_006325_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_18
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_006325_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_18
TS23: midbrain mantle layer Weak Single cells euxassay_006325_18
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006325_18
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_18
Specimen euxassay_006325_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_19
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_19
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_19
Specimen euxassay_006325_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_20
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_20
Specimen euxassay_006325_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_21
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_21
Specimen euxassay_006325_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_22
Specimen euxassay_006325_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_006325_23
Specimen euxassay_006325_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006325_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory