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Gene Expression Data
Assay Details
Assay
Reference: J:156017 Yokoyama S, et al., A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. Dev Cell. 2009 Dec;17(6):836-48
Assay type: RNA in situ
MGI Accession ID: MGI:4429945
Gene symbol: Six1
Gene name: sine oculis-related homeobox 1
Probe: Six1 cDNA4
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen Table 1: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: limb mesenchyme Strong Expression is present in the muscle-forming region.
Specimen S2: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: limb mesenchyme Present S2_Six1 E9.5 This annotation was inferred from Supplementary Table 4.
Specimen S2: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: limb mesenchyme Present S2_Six1 E10.5 This annotation was inferred from Supplementary Table 4.
Specimen S2: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: limb mesenchyme Strong S2_Six1 E11.5 There is strong expression in the posterior mesenchyme and muscle.
Specimen Table S4 - E9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: limb mesenchyme Moderate Regionally restricted Staining is present in the proximal limb.
TS15: trunk somite Strong
TS15: tail Strong
TS15: 1st branchial arch maxillary component Strong Staining is present in the maxillary process.
TS15: olfactory placode Strong
TS15: dorsal root ganglion Strong
Specimen Table S4 - E10.5: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: limb mesenchyme Strong Regionally restricted Staining is present in the middle and proximal limb.
TS17: trunk somite Strong
TS17: 1st branchial arch maxillary component Strong Staining is present in the maxillary process.
TS17: 1st branchial arch Moderate Staining is present in the mandibular arch.
TS17: 2nd branchial arch Moderate Staining is present in the hyoid arch.
TS17: genitourinary system Strong Regionally restricted Staining is present in the external genitalia.
TS17: nasal pit Strong Staining is present in the olfactory placode.
TS17: dorsal root ganglion Strong
Specimen Table S4 - E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: limb mesenchyme Strong Non-Uniform Staining is strong in the proximal limb and muscle and moderate in the middle limb.
TS19: limb Strong Regionally restricted Staining is present in the posterior-distal and posterior-proximal regions of the limb.
TS19: trunk somite Strong
TS19: maxillary process Strong Staining is present in the maxillary process.
TS19: 1st branchial arch Moderate Staining is present in the mandibular arch.
TS19: genital tubercle Strong Staining is present in the external genitalia.
TS19: dorsal root ganglion Strong
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory