About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:60250 Uwanogho DA, et al., Molecular cloning, chromosomal mapping, and developmental expression of a novel protein tyrosine phosphatase-like gene. Genomics. 1999 Dec 15;62(3):406-16
Assay type: RNA in situ
MGI Accession ID: MGI:4420296
Gene symbol: Hacd1
Gene name: 3-hydroxyacyl-CoA dehydratase 1
Probe: Ptpla cDNA
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Authors state that expression was examined on dpc 2.0-8.5 by whole mount in stitu hybridization; not all stages are detailed. These data are described in the text.
Results
Specimen 4A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 2nd branchial arch mesenchyme Present 4A

Specimen 4B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: somite Present Regionally restricted 4B Expression is in the most recently formed somite.

Specimen 4C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: trunk myotome Present 4C
TS19: atrium cardiac muscle Present 4C
TS19: dorsal root ganglion Present 4C
TS19: ventricle cardiac muscle Present 4C
TS19: neural tube Present Regionally restricted 4C Expression is in the ventral part.

Specimen 4D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: common atrial chamber cardiac muscle Present Uniform 4D
TS17: primitive ventricle cardiac muscle Present Uniform 4D
TS17: hepatic primordium Present 4D

Specimen 4E: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: dorsal root ganglion Present 4E
TS19: liver Present 4E

Specimen 4F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: dorsal root ganglion Present 4F
TS19: liver Present 4F

Specimen 4G: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: head mesenchyme Present Regionally restricted 4G Expression is in migrating myoblasts ventral to the developing vertebral column of the neck and thorax.
TS20: trunk mesenchyme Present Regionally restricted 4G Expression is in migrating myoblasts ventral to the developing vertebral column of the neck and thorax.

Specimen 4H: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: trunk mesenchyme Present Regionally restricted 4H Expression is in migrating myoblasts ventral to the developing vertebral column of thorax and abdomen.

Specimen 4I: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: tail mesenchyme Present Regionally restricted 4I Expression is in migrating myoblasts ventral to the developing vertebral column of the tail.

Specimen 5A: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: vertebral axis musculature Present Regionally restricted 5A Expression is in intercostal muscles.
TS21: forelimb musculature Present 5A
TS21: diaphragm Present 5A Expression is in the muscle.

Specimen 5B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: lower jaw mesenchyme Present Regionally restricted 5B Expression is in muscle bundles of the proximal mandible.
TS21: pharynx Present Regionally restricted 5B Expression is in muscle bundles.
TS21: cardiac muscle tissue Present 5B
TS21: lung epithelium Present 5B
TS21: ventricle cardiac muscle Present 5B

Specimen 5C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: eye skeletal muscle Present 5C

Specimen 5D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: anterior abdominal wall muscle Present 5D
TS22: liver Present 5D
TS22: smooth muscle tissue Present Regionally restricted 5D Expression is in the smooth muscles of the digestive and urogenital tracts.

Specimen 5E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: anterior abdominal wall muscle Present 5E
TS22: liver Present 5E
TS22: smooth muscle tissue Present Regionally restricted 5E Expression is in the smooth muscles of the digestive and urogenital tracts.

Specimen 5F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: spinal cord Absent 5F

Specimen 5G: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: tongue extrinsic muscle Present 5G
TS23: tongue intrinsic muscle Present 5G

Specimen 5H: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: tongue extrinsic muscle Present 5H
TS23: tongue intrinsic muscle Present 5H
TS23: tooth Present 5H

Specimen 5I: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Present 5I
TS23: vibrissa follicle Present 5I


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
04/23/2024
MGI 6.23
The Jackson Laboratory