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Gene Expression Data
Assay Details
Assay
Reference: J:13256 Bulfone A, et al., Spatially restricted expression of Dlx-1, Dlx-2 (Tes-1), Gbx-2, and Wnt-3 in the embryonic day 12.5 mouse forebrain defines potential transverse and longitudinal segmental boundaries. J Neurosci. 1993 Jul;13(7):3155-72
Assay type: RNA in situ
MGI Accession ID: MGI:3845654
Gene symbol: Gbx2
Gene name: gastrulation brain homeobox 2
Probe: Gbx2 probe8
Probe preparation: labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1i: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 1i Expression in the prospective dorsal thalamus (DT). Caudal boundary of expression abuts on the pretectum (alar p1); rostral boundary at the zona limitans.
TS20: hindbrain Present Regionally restricted 1i In the hindbrain, rostral end of expression domain in the region derived from rhombomere r6.
TS20: alar columns Present Uniform 1i Uniform expression in both alar and basal plates
TS20: basal columns Present Uniform 1i Uniform expression in both alar and basal plates
TS20: spinal cord Weak Regionally restricted 1i Much less or no expression in a thin logitudinal band in the intermediate zone.
TS20: spinal cord floor plate Absent 1i
TS20: spinal cord roof plate Absent 1i

Specimen 1j: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 1j Expression in the prospective dorsal thalamus. Caudal boundary of expression abuts on the pretectum (alar p1); rostral boundary at the zona limitans).
TS20: epithalamus Absent 1j No expression ventrally to the alar/basal boundary or in the epithalamus.
TS20: hindbrain Present Regionally restricted 1j In the hindbrain, rostral end of expression domain in the region derived from rhombomere r6.
TS20: alar columns Present Uniform 1j Uniform expression in both alar and basal plates
TS20: basal columns Present Uniform 1j Uniform expression in both alar and basal plates
TS20: spinal cord Weak Regionally restricted 1j Much less or no expression in a thin logitudinal band in the intermediate zone.
TS20: spinal cord floor plate Absent 1j
TS20: spinal cord roof plate Absent 1j

Specimen 1k: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 1k Expression in the prospective dorsal thalamus. Caudal boundary of expression abuts on the pretectum (alar p1); rostral boundary at the zona limitans.
TS20: epithalamus Absent 1k No expression ventrally to the alar/basal boundary or in the epithalamus.
TS20: hindbrain Present Regionally restricted 1k In the hindbrain, rostral end of expression domain in the region derived from rhombomere r6.
TS20: alar columns Present Uniform 1k Uniform expression in both alar and basal plates
TS20: basal columns Present Uniform 1k Uniform expression in both alar and basal plates
TS20: spinal cord Weak Regionally restricted 1k Much less or no expression in a thin logitudinal band in the intermediate zone.
TS20: spinal cord floor plate Absent 1k
TS20: spinal cord roof plate Absent 1k

Specimen 1l: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted 1l Expression in the basal telencephalon and anterior entopeduncular area (AEP).
TS20: thalamus Present Regionally restricted 1l Expression in the prospective dorsal thalamus. Caudal boundary of expression abuts on the pretectum (alar p1); rostral boundary at the zona limitans.
TS20: hindbrain Present Regionally restricted 1l In the hindbrain, rostral end of expression domain in the region derived from rhombomere r6.
TS20: alar columns Present Uniform 1l Uniform expression in both alar and basal plates.
TS20: basal columns Present Uniform 1l Uniform expression in both alar and basal plates.
TS20: spinal cord Weak Regionally restricted 1l Much less or no expression in a thin logitudinal band in the intermediate zone.
TS20: spinal cord floor plate Absent 1l
TS20: spinal cord roof plate Absent 1l
TS20: medial ganglionic eminence Present Regionally restricted 1l Expression is in cells centered in the mantle of the rostralmost part of the medial ganglionic eminence (MGE).

Specimen 2g: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 2g Expression in the prospective dorsal thalamus. Caudal boundary of expression abuts on the pretectum (alar p1); rostral boundary at the zona limitans.
TS20: epithalamus Absent 2g No expression ventrally to the alar/basal boundary or in the epithalamus.

Specimen 2h: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diencephalon Present Regionally restricted 2h Expression primarily in cells in the subventricular and mantle layers within the wall of the diencephalon.

Specimen 2i: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted 2i Expression in the basal telencephalon and anterior entopeduncular area (AEP).
TS20: medial ganglionic eminence Present Regionally restricted 2i Expression is in cells centered in the mantle of the rostralmost part of the medial ganglionic eminence (MGE).

Specimen 3c: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 3c Expression in the prospective dorsal thalamus.

Specimen 3d: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: telencephalon Present Regionally restricted 3d Expression in the anterior entopeduncular (AEP).
TS20: medial ganglionic eminence Present Regionally restricted 3d Expression in the mantle of the rostralmost part of the median ganglionic eminence (MGE).

Specimen 4a: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 4a Expression in the prospective dorsal thalamus.
TS20: epithalamus Absent 4a No expression ventrally to the alar/basal boundary or in the epithalamus.

Specimen 4b: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diencephalon Present Regionally restricted 4b Expression primarily in cells in the subventricular and mantle layers within the wall of the diencephalon, defining 4 zones in the dorsal diencephalon wall.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory