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Gene Expression Data
Assay Details
Assay
Reference: J:9951 Duboule D, et al., The structural and functional organization of the murine HOX gene family resembles that of Drosophila homeotic genes. EMBO J. 1989 May;8(5):1497-505
Assay type: RNA in situ
MGI Accession ID: MGI:3844488
Gene symbol: Hoxa1
Gene name: homeobox A1
Probe: Hox-1.6 cDNA 3
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 5B: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo mesenchyme Present Regionally restricted 5B Expression in the embryonic mesoderm, anterior to the first somite, up to the cephalic region, at the level of the foregut and developing heart. Anterior boundary in cephalic mesoderm is roughly at the level of the distal part of the foregut pocket.

Specimen 5C: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo Present 5C

Specimen 5D: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural ectoderm Present Regionally restricted 5D Expression in the neurectoderm, with an anterior limit corresponding to a neuromeric constriction within the future myelencephalon.

Specimen 5E: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo Weak Regionally restricted 5E Weak expression in the most posterior part of the embryo.

Specimen 5G: embryonic day 8.5-9.0 (more )
Structure Level Pattern Image Note
TS14: foregut Strong Regionally restricted 5G Strong expression in foregut epithelium as well as in surrounding mesoderm.

Specimen 5J: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: embryo Weak Regionally restricted 5J Weak expression in the most posterior part of the embryo.

Specimen 5L: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: 3rd branchial arch Present 5L Authors report expression in the foregut immediately posterior to the second branchial pouch, therefore likely at the level of the third branchial arch or pouch.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory