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Gene Expression Data
Assay Details
Assay
Reference: J:42050 Koutnikova H, et al., Studies of human, mouse and yeast homologues indicate a mitochondrial function for frataxin. Nat Genet. 1997 Aug;16(4):345-51
Assay type: RNA in situ
MGI Accession ID: MGI:3818927
Gene symbol: Fxn
Gene name: frataxin
Probe: mf1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Sections were fixed in acetone and subsequently in 4% formaldehyde.
Results
Specimen 3a: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex ventricular layer Present 3a
TS20: ganglionic eminence Present 3a
TS20: telencephalon ventricular layer Present 3a
TS20: midbrain ventricular layer Present Regionally restricted 3a Expression is in the posterior mesencephalon.
TS20: retina Weak Regionally restricted 3a Expression is in the outermost layer.

Specimen 3b: postnatal day 14 (more )
Structure Level Pattern Image Note
TS28: dorsal root ganglion Present Regionally restricted 3b Expression is at the peripheral region.

Specimen 3c: postnatal adult (more )
Structure Level Pattern Image Note
TS28: brain ependyma Present Regionally restricted 3c Expression is at the level of the lateral ventricles.
TS28: choroid plexus Present Regionally restricted 3c Expression is at the level of the lateral ventricles.

Specimen 3d: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Present 3d

Specimen 4a: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex ventricular layer Strong 4a
TS22: ganglionic eminence Strong 4a
TS22: intestine Strong 4a
TS22: liver Strong 4a
TS22: telencephalon ventricular layer Strong 4a
TS22: thymus primordium Strong 4a
TS22: integumental system Strong Regionally restricted 4a Expression is in small islands of brown adipose tissue around the neck and back.
TS22: dorsal root ganglion Present 4a
TS22: heart Present 4a
TS22: lung Present 4a
TS22: midbrain Present Regionally restricted 4a Expression is posterior.
TS22: medulla oblongata Weak 4a
TS22: spinal cord Weak 4a

Specimen 4b: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: brown fat Present 4b

Specimen 4c: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: renal cortex Present 4c

Specimen Not shown: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: brain ependyma Present Throughout development expression persists in the ventricular zone and in the ependymal layer.

Specimen Not shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: liver Strong Expression is in the liver from E10.5 onwards.

Specimen Not shown: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: brown fat Strong

Specimen Not shown: postnatal day 14 (more )
Structure Level Pattern Image Note
TS28: spleen Present
TS28: thymus cortex Present
TS28: brown fat Absent

Specimen Not shown: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory