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Gene Expression Data
Assay Details
Assay
Reference: J:130142 Anderson WJ, et al., Genetic targeting of the endoderm with claudin-6(CreER). Dev Dyn. 2008 Feb;237(2):504-12
Assay type: RNA in situ
MGI Accession ID: MGI:3777669
Gene symbol: Cldn6
Gene name: claudin 6
Probe: Cldn6 probe
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1A: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Present 1A Expression is quite broad throughout the epiblast.
TS9: primitive endoderm Present 1A Expression is present throughout the hypoblast.
TS9: primitive streak Absent 1A
TS9: extraembryonic visceral endoderm Absent 1A There is no expression in some visceral endoderm surrounding the epiblast.

Specimen 1B: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo Present 1B Expression is present in most of the epiblast.
TS11: embryo mesoderm Absent 1B
TS11: primitive streak Absent 1B

Specimen 1C: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo endoderm Present 1C Expression is beginning to be restricted to the endoderm.

Specimen 1D: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Present 1D Expression is quite broad throughout the epiblast.

Specimen 1E: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo Present 1E Expression is quite broad throughout the epiblast.

Specimen 1F: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo endoderm Present 1F Expression is beginning to be restricted to the endoderm.

Specimen 1G: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: embryo endoderm Strong 1G
TS15: gut Strong 1G
TS15: otocyst Present 1G
TS15: future forebrain Present Regionally restricted 1G Expression is present in a small region.

Specimen 1H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: embryo endoderm Present 1H
TS17: gut Present 1H
TS17: mesonephros Present 1H
TS17: otocyst Present 1H
TS17: forebrain Present 1H

Specimen 2A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: left lung rudiment epithelium Strong 2A Expression is present throughout the entire epithelia.
TS19: right lung rudiment epithelium Strong 2A Expression is present throughout the entire epithelia.

Specimen 2B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: left lung epithelium Strong 2B Expression is present throughout the entire epithelia.
TS20: right lung epithelium Strong 2B Expression is present throughout the entire epithelia.

Specimen 2C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: lung epithelium Strong 2C Expression is present throughout the entire epithelia.

Specimen 2D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: left lung epithelium Strong 2D Expression is present throughout the entire epithelia.
TS22: right lung epithelium Strong 2D Expression is present throughout the entire epithelia.

Specimen 2E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lung epithelium Strong 2E Expression is present throught the epithelia, including proximal and distal airways.
TS22: trachea epithelium Present 2E
TS22: lung mesenchyme Absent 2E

Specimen 2F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lung epithelium Strong 2F Expression is present throughout the epithelia.
TS22: lung mesenchyme Absent 2F

Specimen 2G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: pancreas Present Regionally restricted 2G Expression is restricted to the epithelium.
TS22: stomach epithelium Trace 2G

Specimen 2H: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: pancreas Strong Regionally restricted 2H Expression is seen in the branching epithelia. It is not seen in the mesoderm.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory