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Gene Expression Data
Assay Details
Assay
Reference: J:127119 Visel A, et al., Regulatory pathway analysis by high-throughput in situ hybridization. PLoS Genet. 2007 Oct 19;3(10):1867-83
Assay type: RNA in situ
MGI Accession ID: MGI:3767157
Gene symbol: Pax6
Gene name: paired box 6
Probe: MH454 probe 390
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 5 Pax6: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: tongue Weak Regionally restricted 5_Pax6
TS22: face Present Regionally restricted 5_Pax6 Expression was present in Face/Soft Tissues.
TS22: tail Present Regionally restricted 5_Pax6
TS22: forelimb Weak Regionally restricted 5_Pax6
TS22: hindlimb Weak Regionally restricted 5_Pax6
TS22: genital tubercle Weak Regionally restricted 5_Pax6
TS22: skin Weak Regionally restricted 5_Pax6
TS22: lung Present Regionally restricted 5_Pax6
TS22: metanephros Weak Regionally restricted 5_Pax6
TS22: salivary gland Weak Regionally restricted 5_Pax6
TS22: tooth Absent 5_Pax6
TS22: vibrissa follicle Absent 5_Pax6
TS22: esophagus Weak Regionally restricted 5_Pax6
TS22: stomach Present Regionally restricted 5_Pax6
TS22: intestine Absent 5_Pax6
TS22: cochlea Absent 5_Pax6
TS22: inner ear labyrinth Absent 5_Pax6
TS22: olfactory epithelium Present Regionally restricted 5_Pax6
TS22: retina Strong Regionally restricted 5_Pax6
TS22: basal forebrain Strong Regionally restricted 5_Pax6
TS22: piriform cortex Strong Regionally restricted 5_Pax6
TS22: amygdala Strong Regionally restricted 5_Pax6
TS22: pretectum Strong Regionally restricted 5_Pax6
TS22: dorsal root ganglion Weak Regionally restricted 5_Pax6
TS22: cranial ganglion Weak Regionally restricted 5_Pax6
TS22: corpus striatum Present Regionally restricted 5_Pax6
TS22: pallidum Absent 5_Pax6
TS22: midbrain tegmentum Strong Regionally restricted 5_Pax6
TS22: spinal cord Strong Regionally restricted 5_Pax6
TS22: pons Strong Regionally restricted 5_Pax6
TS22: medulla oblongata Strong Regionally restricted 5_Pax6
TS22: telencephalon septum Strong Regionally restricted 5_Pax6
TS22: thalamus Strong Regionally restricted 5_Pax6
TS22: hypothalamus Present Regionally restricted 5_Pax6
TS22: cerebellum Strong Regionally restricted 5_Pax6
TS22: superior colliculus Absent 5_Pax6
TS22: inferior colliculus Absent 5_Pax6
TS22: main olfactory bulb Present Regionally restricted 5_Pax6
TS22: neocortex Strong Regionally restricted 5_Pax6
TS22: hippocampus Present Regionally restricted 5_Pax6
TS22: ureter Absent 5_Pax6
TS22: bladder Absent 5_Pax6
TS22: urethra Weak Regionally restricted 5_Pax6
TS22: main bronchus Absent 5_Pax6
TS22: trachea Weak Regionally restricted 5_Pax6
TS22: palatal shelf Absent 5_Pax6
TS22: middle ear Absent 5_Pax6
TS22: pharynx Weak Regionally restricted 5_Pax6
TS22: larynx Weak Regionally restricted 5_Pax6
TS22: optic nerve Weak Regionally restricted 5_Pax6
TS22: liver Absent 5_Pax6
TS22: thymus primordium Weak Regionally restricted 5_Pax6
TS22: thyroid gland Absent 5_Pax6
TS22: pituitary gland Present Regionally restricted 5_Pax6
TS22: pancreas Strong Regionally restricted 5_Pax6
TS22: spleen primordium Absent 5_Pax6 Expression was absent in Spleen.
TS22: adrenal gland Weak Regionally restricted 5_Pax6
TS22: gonad Weak Regionally restricted 5_Pax6
TS22: musculature Weak Regionally restricted 5_Pax6 Expression was weak in Muscle System.
TS22: choroid plexus Weak Regionally restricted 5_Pax6
TS22: meninges Absent 5_Pax6
TS22: blood vessel Absent 5_Pax6
TS22: heart atrium Weak Regionally restricted 5_Pax6
TS22: heart ventricle Present Regionally restricted 5_Pax6
TS22: appendicular skeleton Weak Regionally restricted 5_Pax6
TS22: axial skeleton Present Regionally restricted 5_Pax6
TS22: cranium Absent 5_Pax6
TS22: facial bone primordium Weak Regionally restricted 5_Pax6
TS22: lens Present Regionally restricted 5_Pax6
TS22: cornea Present Regionally restricted 5_Pax6

Specimen 7A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex ventricular layer Strong 7A

Specimen 8A: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong 8A


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory