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Gene Expression Data
Assay Details
Assay
Reference: J:91466 Osman NM, et al., Glycosyltransferase encoding gene EXTL3 is differentially expressed in the developing and adult mouse cerebral cortex. Brain Res Dev Brain Res. 2004 Jul 19;151(1-2):111-7
Assay type: RNA in situ
MGI Accession ID: MGI:3762901
Gene symbol: Extl3
Gene name: exostosin-like glycosyltransferase 3
Probe: Extl3 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Fixative was 10% formaline/70% methanol
Results
Specimen 1A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindbrain ventricular layer Strong 1A
TS19: mesencephalic vesicle Strong 1A
TS19: telencephalon ventricular layer Strong 1A

Specimen 1C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: ganglionic eminence Strong 1C
TS20: medulla oblongata ventricular layer Strong 1C
TS20: telencephalon ventricular layer Strong 1C
TS20: vestibulo-cochlear ganglion Present 1C

Specimen 1D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord ventricular layer Strong 1D
TS20: dorsal root ganglion Present 1D

Specimen 1E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Present 1E
TS22: hindbrain ventricular layer Present 1E
TS22: midbrain ventricular layer Present 1E
TS22: cerebellum Weak 1E
TS22: hypothalamus Weak 1E
TS22: thalamus Weak 1E

Specimen 1F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebral cortex Strong 1F
TS24: hypothalamus Weak 1F
TS24: telencephalon ventricular layer Weak 1F
TS24: thalamus Weak 1F

Specimen 2A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: telencephalon ventricular layer Very strong 2A Expression is in most cells.

Specimen 2B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex intermediate zone Strong 2B
TS20: cerebral cortex ventricular layer Strong 2B
TS20: cortical plate Present Single cells 2B A moderate number of heavily stained cells appear among many lightly stained or negative cells in the preplate.

Specimen 2C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex ventricular layer Strong 2C Expression is in mitotic cells.

Specimen 2D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cortical plate Present Single cells 2D A moderate number of heavily stained cells appear among many lightly stained or negative cells in the preplate.

Specimen 2E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex intermediate zone Present Uniform 2E
TS22: cerebral cortex ventricular layer Present Uniform 2E
TS22: cortical plate Present Uniform 2E

Specimen 2F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cortical plate Very strong 2F
TS24: cerebral cortex intermediate zone Weak 2F
TS24: cerebral cortex ventricular layer Weak 2F

Specimen 2G: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cortical plate Strong Spotted 2G There are a large number of heavily stained cells among moderate number of less intensely stained and some negatively stained populations of cells.

Specimen 2H: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cortical plate Strong Spotted 2H There are a large number of heavily stained cells among moderate number of less intensely stained and some negatively stained populations of cells.

Specimen 3A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer V Strong 3A
TS28: cortical layer I Moderate 3A
TS28: cortical layer II Moderate 3A
TS28: cortical layer III Moderate 3A
TS28: cortical layer IV Moderate 3A
TS28: cortical layer VI Moderate 3A

Specimen 3C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer V Strong Single cells 3C The pyramidal neurons are showing the strongest color reaction while the granule-type neurons are showing considerably less intense signal. Absent in glial cells.

Specimen 3D: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer V Very strong Single cells 3D Expression is in the giant pyramidal cells of Betz, the apical dendrites of these cells are also showing intense positive reaction.

Specimen 3E: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus pyramidal cell layer Strong 3E
TS28: hippocampus granule cell layer Present 3E
TS28: dentate gyrus polymorphic layer Present 3E

Specimen 3F: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus pyramidal cell layer Strong 3F
TS28: dentate gyrus polymorphic layer Present 3F
TS28: hippocampus granule cell layer Present 3F
TS28: choroid plexus Present Regionally restricted 3F Expression is in the choroid plexus of the inferior horn of the lateral ventricle.

Specimen 3G: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Strong 3G
TS28: main olfactory bulb glomerular layer Present Regionally restricted 3G Expression is in most neurons.
TS28: main olfactory bulb granule cell layer Present Regionally restricted 3G Expression is in most neurons.

Specimen 3H: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Strong 3H
TS28: main olfactory bulb glomerular layer Present 3H Expression is in most neurons.
TS28: main olfactory bulb granule cell layer Present 3H Expression is in most neurons.

Specimen Not shown: postnatal adult (more )
Structure Level Pattern Image Note
TS28: basal ganglia Present Expression is in most neurons.
TS28: thalamus Present Expression is in most neurons.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory