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Gene Expression Data
Assay Details
Assay
Reference: J:16396 Raju K, et al., Characterization and developmental expression of Tlx-1, the murine homolog of HOX11. Mech Dev. 1993 Nov;44(1):51-64
Assay type: RNA in situ
MGI Accession ID: MGI:3760112
Gene symbol: Tlx1
Gene name: T cell leukemia, homeobox 1
Probe: Hox11 probe2
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 4A: embryonic day 9.5 (more )
Note: This is a sagittal section.
Structure Level Pattern Image Note
TS15: 1st branchial arch ectoderm Strong 4A Expression is present in the surface ectoderm.
TS15: 2nd branchial arch ectoderm Strong 4A Expression is present in the surface ectoderm.
TS15: 1st branchial arch mesenchyme Strong Regionally restricted 4A Expression is present in the central mesenchyme.
TS15: 2nd branchial arch mesenchyme Strong Regionally restricted 4A Expression is present in the central mesenchyme.
TS15: pharynx Present 4A There is a diffuse band extending dorsally in the region of the presumptive pharynx.

Specimen 4B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: acoustic ganglion Strong 4B There is strong expression in the peripheral margins.
TS17: facial ganglion Strong 4B There is strong expression in the peripheral margins.
TS17: trigeminal ganglion Strong 4B There is strong expression in the peripheral margins.
TS17: 1st branchial arch ectoderm Present 4B Expression is present in the surface ectoderm.

Specimen 4C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: glossopharyngeal ganglion Present 4C
TS17: future spinal cord Present Non-Uniform 4C There are discontinuous regions of staining.
TS17: 1st branchial arch ectoderm Present 4C Expression is present in the surface ectoderm.
TS17: 2nd branchial arch ectoderm Present 4C Expression is present in the surface ectoderm.
TS17: 1st branchial arch mesenchyme Present 4C Expression is present in the central mesenchyme.
TS17: 2nd branchial arch mesenchyme Present 4C Expression is present in the central mesenchyme.

Specimen 4D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 1st branchial arch ectoderm Present 4D Expression is present in the surface ectoderm.
TS17: 2nd branchial arch ectoderm Present 4D Expression is present in the surface ectoderm.
TS17: 3rd branchial arch ectoderm Present 4D Expression is present in the surface ectoderm.
TS17: 4th branchial arch ectoderm Present 4D Expression is present in the surface ectoderm.
TS17: 1st branchial arch mesenchyme Present 4D Expression is present in the central mesenchyme.
TS17: 2nd branchial arch mesenchyme Present 4D Expression is present in the central mesenchyme.

Specimen 5A: embryonic day 12.5 (more )
Note: This is a midsagittal section.
Structure Level Pattern Image Note
TS20: medulla oblongata Strong Regionally restricted 5A Expression is present in two bands on the dorsal and ventral aspects of the curvature of the pons-medulla of the hindbrain. This expression is restricted to the midline of the embryo and is absent from lateral regions of the hindbrain.
TS20: pons Strong Regionally restricted 5A Expression is present in two bands on the dorsal and ventral aspects of the curvature of the pons-medulla of the hindbrain. This expression is restricted to the midline of the embryo and is absent from lateral regions of the hindbrain.
TS20: trigeminal ganglion Strong Uniform 5A
TS20: pancreas Strong 5A

Specimen 5B: embryonic day 12.5 (more )
Note: This is a midsagittal section.
Structure Level Pattern Image Note
TS20: spinal cord mantle layer Present Regionally restricted 5B Expression is present in diffuse, centrally located band extending from the base of the hindbrain to the lumbar region.
TS20: tongue epithelium Present 5B
TS20: mandibular process Present Regionally restricted 5B Expression is present in the surface epithelium.
TS20: tongue mesenchyme Present Regionally restricted 5B Expression is present in the lingual mesenchyme.

Specimen Not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord mantle layer Present Expression is present in a diffuse, centrally located band extending to the caudal-most end of the spinal cord.

Specimen 5C: embryonic day 13.5 (more )
Note: This is a parasagittal section.
Structure Level Pattern Image Note
TS21: pinna Present 5C Expression is present in a discrete band lining the internal margin of the pinna, extending along an arc towards the vestibulocochlear ganglion.

Specimen 6B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: tongue epithelium Present Regionally restricted 6A/B Expression is present in the dorsal aspect and distal region of the lingual surface epithelium.
TS20: tongue mesenchyme Present Graded 6A/B There is a distal to proximal gradient of expression evident in the tongue mesenchyme.
TS20: mandibular process Present Regionally restricted 6A/B Expression in the mandibular epithelium extends over the dorsal aspect and further concentrates in regions of its thickening and invagination at sites of developing tooth primordia.

Specimen 6D: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: tongue epithelium Present 6C/D
TS21: tongue mesenchyme Present 6C/D
TS21: lower jaw epithelium Present 6C/D Expression is present in the mandibular epithelium and clearly marks the tooth bud.
TS21: lower jaw tooth Present 6C/D Expression is present in the mandibular epithelium and clearly marks the tooth bud.
TS21: lower jaw mesenchyme Present 6C/D Expression is present in tracts of condensing mandibular mesenchyme, thought to represent presumptive muscle.

Specimen 7A: embryonic day 13.5 (more )
Note: This is a horizontal section.
Structure Level Pattern Image Note
TS21: trigeminal ganglion Strong 7A
TS21: pons Present Regionally restricted 7A Expression is present in the caudal region.
TS21: medulla oblongata Present Regionally restricted 7A Expression is present in the rostral region.
TS21: vestibulo-cochlear ganglion Strong 7A Although expression is clearly present in the vestibulocochlear ganglia, sections failed to demonstrate whether there is also expression in the facial ganglion.

Specimen 7B: embryonic day 13.5 (more )
Note: This is a horizontal section.
Structure Level Pattern Image Note
TS21: tongue extrinsic pre-muscle mass Present 7B Expression is present in the intrinsic and extrinsic muscle tracts of the tongue.
TS21: tongue muscle Present 7B Expression is present in the intrinsic and extrinsic muscle tracts of the tongue.
TS21: submandibular gland primordium Present 7B

Specimen 7C: embryonic day 13.5 (more )
Note: This is a horizontal section.
Structure Level Pattern Image Note
TS21: tongue extrinsic pre-muscle mass Present 7C Expression is present in the intrinsic and extrinsic muscle tracts of the tongue.
TS21: tongue muscle Present 7C Expression is present in the intrinsic and extrinsic muscle tracts of the tongue.
TS21: pinna Present 7C Expression is present in a discrete band lining the internal margin of the pinna, extending along an arc towards the vestibulocochlear ganglion.

Specimen 7D: embryonic day 13.5 (more )
Note: This is a horizontal section.
Structure Level Pattern Image Note
TS21: tongue extrinsic pre-muscle mass Present 7D Expression is present in the intrinsic and extrinsic muscle tracts of the tongue.
TS21: tongue muscle Present 7D Expression is present in the intrinsic and extrinsic muscle tracts of the tongue.
TS21: external auditory meatus Present Regionally restricted 7D Expression is present in the lining.

Specimen 8A/B: embryonic day 15.5 (more )
Note: This is a sagittal section.
Structure Level Pattern Image Note
TS23: tongue epithelium Present 8A/B
TS23: tongue mesenchyme Absent 8A/B
TS23: tooth Strong 8A/B There is strong hybridization in developing tooth primorida.
TS23: submandibular gland primordium Strong 8A/B Expression appears to be evenly distributed throughout the lobules.
TS23: cartilage Present 8A/B There is expression in condensing mesenchyme, presumably cartilage, of the ribs and vertebrae.
TS23: trigeminal ganglion Absent 8A/B
TS23: vestibulo-cochlear ganglion Absent 8A/B

Specimen Not shown: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Absent
TS23: pons Present Regionally restricted Expression is present in the caudal region.
TS23: medulla oblongata Present Regionally restricted Expression is present in the rostral region.
TS23: pancreas Absent

Specimen Not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: lower jaw tooth Present Expression is present in developing tooth primordia.
TS24: submandibular gland Present

Specimen 9B/C: postnatal day 10 (more )
Note: This is a cross section.
Structure Level Pattern Image Note
TS28: tongue papilla epithelium Present 9B/C , 9A Expression is localized to the keratinized epithelium of papillae.

Specimen 10B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: pancreas Strong Non-Uniform 10B There is strong expression in the pancreatic primorida. There are focal areas of weak or no expression corresponding to the columnar epithelium lining the interlobular ducts.

Specimen Not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: pancreatic duct Strong There is strong expression in the pancreatic duct.

Specimen Not shown: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: pancreas Present

Specimen Not shown: postnatal newborn (more )
Structure Level Pattern Image Note
TS27: thymus Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory