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Gene Expression Data
Assay Details
Assay
Reference: J:16396 Raju K, et al., Characterization and developmental expression of Tlx-1, the murine homolog of HOX11. Mech Dev. 1993 Nov;44(1):51-64
Assay type: RNA in situ
MGI Accession ID: MGI:3760110
Gene symbol: Tlx1
Gene name: T cell leukemia, homeobox 1
Probe: Hox11 probe2
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3A: embryonic day 8.5 (more )
Note: This embryo contains 9 somites. This is a frontal view.
Structure Level Pattern Image Note
TS13: 1st branchial arch ectoderm Present 3A Expression is present in the surface ectoderm.
TS13: 1st branchial arch mesenchyme Present Regionally restricted 3A Expression is present in the central mesenchyme of the arch.
Specimen 3B: embryonic day 8.5 (more )
Note: This embryo contains 11 somites. This is a side view.
Structure Level Pattern Image Note
TS13: 1st branchial arch ectoderm Present 3B Expression is present in the surface ectoderm.
TS13: 2nd branchial arch ectoderm Present 3B Expression is present in the surface ectoderm.
TS13: 1st branchial arch mesenchyme Present Regionally restricted 3B Expression is present in the central mesenchyme of the arch.
TS13: 2nd branchial arch mesenchyme Present Regionally restricted 3B Expression is present in the central mesenchyme of the arch.
Specimen 3C: embryonic day 8.5 (more )
Note: This embryo contains 9 somites. This is a frontal view.
Structure Level Pattern Image Note
TS13: 1st branchial arch ectoderm Present 3C Expression is present in the surface ectoderm.
TS13: 1st branchial arch mesenchyme Present Regionally restricted 3C Expression is present in the central mesenchyme of the arch.
Specimen 3D: embryonic day 8.5 (more )
Note: This embryo contains 11 somites. This is a side view.
Structure Level Pattern Image Note
TS13: 1st branchial arch ectoderm Present 3D Expression is present in the surface ectoderm.
TS13: 2nd branchial arch ectoderm Present 3D Expression is present in the surface ectoderm.
TS13: 1st branchial arch mesenchyme Present Regionally restricted 3D Expression is present in the central mesenchyme of the arch.
TS13: 2nd branchial arch mesenchyme Present Regionally restricted 3D Expression is present in the central mesenchyme of the arch.
Specimen 3E: embryonic day 9.0 (more )
Note: This embryo contains 13 somites.
Structure Level Pattern Image Note
TS14: 1st branchial arch Present 3E
TS14: 2nd branchial arch Present 3E
TS14: 3rd branchial arch ectoderm Present 3E
TS14: branchial arch ectoderm Present 3E Expression is present in the surface ectoderm at the site of the future third and fourth arches.
TS14: pharyngeal region Present Regionally restricted 3E Expression is present in the presumptive pharynx. It is unclear whether this expression also encompasses the thyroid rudiment as well.
Specimen 3F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch ectoderm Present Regionally restricted 3F Expression in the surface ectoderm is confined to the ventral midline running between the two lateral components each arch.
TS15: 1st branchial arch ectoderm Present Regionally restricted 3F Expression in the surface ectoderm is confined to the ventral midline running between the two lateral components each arch.
TS15: 2nd branchial arch ectoderm Present Regionally restricted 3F Expression in the surface ectoderm is confined to the ventral midline running between the two lateral components each arch.
TS15: pharynx Strong 3F
Specimen 3G: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch ectoderm Present Regionally restricted 3G Expression in the surface ectoderm is confined to the ventral midline running between the two lateral components each arch.
TS15: 1st branchial arch ectoderm Present Regionally restricted 3G Expression in the surface ectoderm is confined to the ventral midline running between the two lateral components each arch.
TS15: 2nd branchial arch ectoderm Present Regionally restricted 3G Expression in the surface ectoderm is confined to the ventral midline running between the two lateral components each arch.
TS15: pharynx Strong 3G
Specimen 3H: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS15: 1st branchial arch mesenchyme Present 3H Expression is present in the central mesenchyme.
TS15: 2nd branchial arch mesenchyme Present 3H Expression is present in the central mesenchyme.
TS15: 1st branchial arch ectoderm Present Regionally restricted 3H Expression in the surface ectoderm is confined to the ventral midline running between the two lateral components each arch.
TS15: 2nd branchial arch ectoderm Present Regionally restricted 3H Expression in the surface ectoderm is confined to the ventral midline running between the two lateral components each arch.
TS15: pharynx Strong 3H It is unclear whether this expression also encompasses the thyroid rudiment.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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