Gene Expression Data
Assay Details
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Assay
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Reference:
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J:99122
Choi JD, et al., A novel variant of inpp5f is imprinted in brain, and its expression is correlated with differential methylation of an internal CpG island. Mol Cell Biol. 2005 Jul;25(13):5514-22
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3718085
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Gene symbol:
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Inpp5f
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Gene name:
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inositol polyphosphate-5-phosphatase F
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Probe:
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Inpp5f probe1
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Probe preparation:
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Antisense labelled with S35 RNA
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Results
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Specimen
5a:
embryonic day 14.5
(more )
Specimen
5a:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 14.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: brain |
Present |
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5a
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Specimen
5b:
embryonic day 12.5
(more )
Specimen
5b:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Strong |
Regionally restricted |
5b
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Expression was detected in the lateral cortex. Strong labeling was primarily outside the ventricular (proliferative) zone.
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| TS20: cerebral cortex ventricular layer |
Weak |
Regionally restricted |
5b
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Some expression was seen dorsally and frontally.
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Specimen
5c:
embryonic day 12.5
(more )
Specimen
5c:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: hindbrain |
Strong |
Regionally restricted |
5c
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Expression was strong in the maturing regions.
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| TS20: midbrain |
Strong |
Regionally restricted |
5c
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Expression was strong in the maturing regions.
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| TS20: brain ventricular layer |
Weak |
Regionally restricted |
5c
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Expression was reduced in the ventricular zone.
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Specimen
5d:
embryonic day 12.5
(more )
Specimen
5d:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: hindbrain |
Present |
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5d
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| TS20: midbrain |
Present |
Regionally restricted |
5d
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Expression was detected in a small part of the tectum.
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| TS20: brain |
Present |
Regionally restricted |
5d
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Expression was strong in the region that will become the brainstem.
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| TS20: cerebellum primordium |
Present |
Regionally restricted |
5d
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Expression was detected in the rhombic lip.
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Specimen
5e:
embryonic day 12.5
(more )
Specimen
5e:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
5f:
embryonic day 14.5
(more )
Specimen
5f:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 14.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: tectum |
Present |
Graded |
5f
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There was a gradient of expression from the rostral to the caudal region of the tectum.
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| TS22: hindbrain |
Strong |
Regionally restricted |
5f
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Expression was strong primarily outside the ventricular zone.
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| TS22: midbrain |
Strong |
Regionally restricted |
5f
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Expression was strong primarily outside the ventricular zone.
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| TS22: cerebellum |
Strong |
Regionally restricted |
5f
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Expression was strong in the rhombic lip.
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Specimen
not shown:
embryonic day 16.5
(more )
Specimen
not shown:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 16.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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