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Gene Expression Data
Assay Details
Assay
Reference: J:75718 Akiba Y, et al., Localization of mRNAs for phosphatidylinositol phosphate kinases in the mouse brain during development. Brain Res Gene Expr Patterns. 2002 Jan;1(2):123-33
Assay type: RNA in situ
MGI Accession ID: MGI:3714854
Gene symbol: Pikfyve
Gene name: phosphoinositide kinase, FYVE type zinc finger containing
Probe: Pip5k3 oligo1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Relative expression levels for each isoform are summarized for P21 in Table 1. The probe used in this assay was 3' labelled.
Results
Specimen Table 1: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present
TS28: cerebellum granule cell layer Present
TS28: amygdala Weak
TS28: cortical layer II Weak
TS28: cortical layer III Weak
TS28: cortical layer IV Weak
TS28: cortical layer V Weak
TS28: cortical layer VI Weak
TS28: dentate gyrus Weak
TS28: hippocampus CA1 Weak
TS28: hippocampus CA2 Weak
TS28: hippocampus CA3 Weak
TS28: main olfactory bulb glomerular layer Weak
TS28: main olfactory bulb granule cell layer Weak
TS28: main olfactory bulb mitral cell layer Weak
TS28: medial habenular nucleus Weak
TS28: piriform cortex Weak
TS28: caudate-putamen Absent
TS28: corpus callosum Absent
TS28: fimbria hippocampus Absent
TS28: hypothalamus Absent
TS28: inferior colliculus Absent
TS28: inferior olivary nucleus Absent
TS28: medulla oblongata Absent
TS28: pontine nucleus Absent
TS28: subiculum Absent
TS28: superior colliculus Absent
TS28: thalamus Absent
TS28: forebrain Present Regionally restricted Expression is absent in the septum.
Specimen Not shown: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: brain gray matter Weak
Specimen Not shown: postnatal day 56 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Weak
TS28: cerebellum granule cell layer Weak
TS28: cerebral cortex Weak
TS28: hippocampus layer Weak
TS28: main olfactory bulb Weak
TS28: brainstem nucleus Absent
TS28: diencephalon Absent
Specimen 8a: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: brain gray matter Weak 8a
TS28: cerebellum external granule cell layer Present 8a
TS28: cerebellum internal granule cell layer Present 8a
Specimen 8b: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Weak 8b
TS28: cerebellum granule cell layer Weak 8b
TS28: cerebral cortex Weak 8b
TS28: hippocampus layer Weak 8b
TS28: main olfactory bulb Weak 8b
TS28: brainstem nucleus Absent 8b
TS28: diencephalon Absent 8b
Specimen 8c: postnatal day 7 (more )
Note: Panel (c) is a higher magnification view of region enclosed by rectangle in (a).
Structure Level Pattern Image Note
TS28: cerebellum external granule cell layer Present 8c
TS28: cerebellum internal granule cell layer Present 8c
Specimen 8d: postnatal day 21 (more )
Note: Panel (d) is a higher magnification view of region enclosed by rectangle in (b).
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Present Patchy 8d
Specimen 8e: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: caudate-putamen Absent 8e
Specimen 8f: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: medial habenular nucleus Weak 8f
Specimen 8g: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Present 8g
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory