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Gene Expression Data
Assay Details
Assay
Reference: J:75718 Akiba Y, et al., Localization of mRNAs for phosphatidylinositol phosphate kinases in the mouse brain during development. Brain Res Gene Expr Patterns. 2002 Jan;1(2):123-33
Assay type: RNA in situ
MGI Accession ID: MGI:3714852
Gene symbol: Pip4k2c
Gene name: phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
Probe: Pip5k2c oligo1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Relative expression levels for each isoform are summarized for P21 in Table 1. The probe used in this assay was 3' labelled.
Results
Specimen Table 1: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Moderate
TS28: hippocampus CA2 Moderate
TS28: hippocampus CA3 Moderate
TS28: main olfactory bulb mitral cell layer Moderate
TS28: piriform cortex Moderate
TS28: cerebellum Purkinje cell layer Present
TS28: cortical layer II Present
TS28: cortical layer III Present
TS28: cortical layer IV Present
TS28: cortical layer VI Present
TS28: dentate gyrus Present
TS28: main olfactory bulb granule cell layer Present
TS28: amygdala Weak
TS28: caudate-putamen Weak
TS28: cerebellum granule cell layer Weak
TS28: cortical layer V Weak
TS28: hypothalamus Weak
TS28: inferior colliculus Weak
TS28: inferior olivary nucleus Weak
TS28: main olfactory bulb glomerular layer Weak
TS28: medial habenular nucleus Weak
TS28: subiculum Weak
TS28: superior colliculus Weak
TS28: thalamus Weak
TS28: forebrain Weak Regionally restricted Expression is in the septum.
TS28: corpus callosum Absent
TS28: fimbria hippocampus Absent
TS28: medulla oblongata Absent
TS28: pontine nucleus Absent
Specimen Not shown: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: brain gray matter Weak
Specimen 7a: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: olfactory cortex mantle layer Weak 7a
Specimen 7b: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: brain gray matter Weak 7b
TS28: cerebellum external granule cell layer Present 7b
TS28: cerebellum internal granule cell layer Present 7b
TS28: main olfactory bulb mitral cell layer Present 7b
Specimen 7c: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Moderate 7c
TS28: hippocampus CA1 Moderate 7c
TS28: hippocampus CA2 Moderate 7c
TS28: hippocampus CA3 Moderate 7c
TS28: main olfactory bulb mitral cell layer Moderate 7c
TS28: piriform cortex Moderate 7c
TS28: cortical layer II Present 7c
TS28: cortical layer III Present 7c
TS28: cortical layer IV Present 7c
TS28: cortical layer VI Present 7c
TS28: cerebellum granule cell layer Weak 7c
TS28: cortical layer V Weak 7c
TS28: dentate gyrus granule cell layer Weak 7c
TS28: cerebellum white matter Absent 7c
TS28: cerebral hemisphere white matter Absent 7c
Specimen 7d: embryonic day 18.5 (more )
Note: Panel (d) is a higher magnification view of region enclosed by rectangle in (b).
Structure Level Pattern Image Note
TS26: cerebellum Present Regionally restricted 7d Expression is in the internal and external granule cell layer.
Specimen 7e: postnatal day 7 (more )
Note: Panel (e) is a higher magnification view of region enclosed by rectangle in (c).
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Weak 7e
TS28: cerebellum Purkinje cell layer Present 7e
Specimen 7f: postnatal day 21 (more )
Note: Panel (f) is a higher magnification view of region enclosed by parentheses in (c).
Structure Level Pattern Image Note
TS28: hippocampus CA1 Moderate 7f
TS28: hippocampus CA2 Moderate 7f
TS28: hippocampus CA3 Moderate 7f
Specimen 7g: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: forebrain Weak Regionally restricted 7g Expression is in the septum.
TS28: cerebral cortex Present 7g
Specimen 7h: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Moderate 7h
TS28: hippocampus CA2 Moderate 7h
TS28: hippocampus CA3 Moderate 7h
TS28: cerebral cortex Present 7h
TS28: thalamus Weak 7h
Specimen 7i: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Weak 7i
Specimen Not shown: postnatal day 56 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Moderate
TS28: hippocampus CA1 Moderate
TS28: hippocampus CA2 Moderate
TS28: hippocampus CA3 Moderate
TS28: main olfactory bulb mitral cell layer Moderate
TS28: piriform cortex Moderate
TS28: cortical layer II Present
TS28: cortical layer III Present
TS28: cortical layer IV Present
TS28: cortical layer VI Present
TS28: cerebellum granule cell layer Weak
TS28: cortical layer V Weak
TS28: dentate gyrus granule cell layer Weak
TS28: cerebellum white matter Absent
TS28: cerebral hemisphere white matter Absent
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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