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Gene Expression Data
Assay Details
Assay
Reference: J:66050 Grimmond S, et al., Cloning, mapping, and expression analysis of a gene encoding a novel mammalian EGF-related protein (SCUBE1). Genomics. 2000 Nov 15;70(1):74-81
Assay type: RNA in situ
MGI Accession ID: MGI:3710143
Gene symbol: Scube1
Gene name: signal peptide, CUB domain, EGF-like 1
Probe: clone 1C
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen Not shown: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo Absent

Specimen 3a: embryonic day 8.0 (more )
Note: 3 somite stage.
Structure Level Pattern Image Note
TS12: future prosencephalon Weak Regionally restricted 3a There are low levels of expression in the ventral forebrain.

Specimen 3b: embryonic day 8.5 (more )
Note: 7 somite stage.
Structure Level Pattern Image Note
TS13: future prosencephalon Strong Regionally restricted 3b Expression is present in the ventral forebrain.

Specimen 3c: embryonic day 9.0 (more )
Note: 13 somite stage.
Structure Level Pattern Image Note
TS14: somite Present Regionally restricted 3c Expression is present in the dorsal-most region of the somites.
TS14: surface ectoderm Present Regionally restricted 3c Expression is present in the surface ectoderm of the cranial region.
TS14: prosencephalon Present Regionally restricted 3c Expression is present in the ventral forebrain.
TS14: allantois Present 3c

Specimen 3d: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: trunk dermomyotome Present Regionally restricted 3d Expression is present in the dorsal-most region of the somites.
TS15: surface ectoderm Present 3d Expression is seen throughout the surface ectoderm.
TS15: infundibular recess of 3rd ventricle Present 3d Expression is present in the infundibulum.

Specimen 3e: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: limb Present 3e
TS17: trunk dermomyotome Present 3e
TS17: surface ectoderm Present 3e Expression is seen throughout the surface ectoderm.
TS17: infundibular recess of 3rd ventricle Present 3e Expression is present in the infundibulum.

Specimen 3f: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: infundibular recess of 3rd ventricle Strong 3f There is prominent expression in the infundibulum.

Specimen 3g: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: infundibular recess of 3rd ventricle Present 3g There is expression in the infundibulum.
TS17: Rathke's pouch Absent 3g

Specimen 3h: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: trunk dermomyotome Present 3h

Specimen 3i: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: hand mesenchyme Present Regionally restricted 3i Expression is present in the digital mesenchyme.

Specimen Not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: gonad Present Expression is present in the developing gonads of both males and females.

Specimen Not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: gonad Present Expression is present in the developing gonads of both males and females.

Specimen 3j: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: testis mesenchyme Present 3j Expression is present in the interstitial region between the developing sex cords.
TS21: primary sex cord Absent 3j

Specimen Not shown: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: ovary Present Uniform There is uniform expression throughout.

Specimen Not shown: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: skin Present Regionally restricted Expression is present in the hair follicles.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory