Gene Expression Data
Assay Details
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Assay
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Reference:
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J:85845
Aubert J, et al., Screening for mammalian neural genes via fluorescence-activated cell sorter purification of neural precursors from Sox1-gfp knock-in mice. Proc Natl Acad Sci U S A. 2003 Sep 30;100 Suppl 1:11836-41
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Assay type:
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In situ reporter (knock in)
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MGI Accession ID:
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MGI:3653690
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Gene symbol:
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Sox1
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Gene name:
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SRY (sex determining region Y)-box 1
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Reporter:
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GFP
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Direct Detection
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Results
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Specimen
not shown:
embryonic day 8.5; Sox1tm1Asmi/Sox1 +
(more  )
Specimen
not shown:
(close  )
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Genetic Background:
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involves: 129P2/OlaHsd * MF1
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Mutant Allele(s):
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Sox1tm1Asmi/Sox1+
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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Not Specified
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Fixation:
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4% Paraformaldehyde
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Specimen
1Di:
embryonic day 9.5; Sox1tm1Asmi/Sox1 +
(more )
Specimen
1Di:
(close )
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Genetic Background:
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involves: 129P2/OlaHsd * MF1
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Mutant Allele(s):
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Sox1tm1Asmi/Sox1+
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: neural tube |
Present |
Uniform |
1D i
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Expression was detected throughout the neural tube.
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Specimen
1Dii:
embryonic day 11.5; Sox1tm1Asmi/Sox1 +
(more )
Specimen
1Dii:
(close )
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Genetic Background:
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involves: 129P2/OlaHsd * MF1
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Mutant Allele(s):
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Sox1tm1Asmi/Sox1+
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: brain |
Present |
Regionally restricted |
1D ii
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Expression was detected throughout the brain and neural tube but was excluded from the midline roof and floor plate.
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| TS19: neural tube |
Present |
Regionally restricted |
1D ii
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Expression was detected throughout the brain and neural tube but was excluded from the midline roof and floor plate.
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| TS19: lens vesicle |
Present |
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1D ii
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Specimen
1Diii:
embryonic day 12.5; Sox1tm1Asmi/Sox1 +
(more )
Specimen
1Diii:
(close )
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Genetic Background:
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involves: 129P2/OlaHsd * MF1
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Mutant Allele(s):
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Sox1tm1Asmi/Sox1+
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
1Div & inset:
postnatal adult; Sox1tm1Asmi/Sox1 +
(more )
Note: Inset is a higher magnification of the vibratome section embedded in 2% agarose.
Specimen
1Div & inset:
(close )
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Genetic Background:
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involves: 129P2/OlaHsd * MF1
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Mutant Allele(s):
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Sox1tm1Asmi/Sox1+
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Age:
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postnatal adult
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Agarose
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Note:
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Inset is a higher magnification of the vibratome section embedded in 2% agarose.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS28: dentate gyrus |
Present |
Regionally restricted |
1D iv
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Expression was detected in the subgranular layer of the dentate gyrus. Numerous positive cells were noted on the inner subgranular layer.
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Analysis Tools
