Gene Expression Data
Assay Details
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Assay
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Reference:
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J:107595
Landsberg RL, et al., Hindbrain rhombic lip is comprised of discrete progenitor cell populations allocated by Pax6. Neuron. 2005 Dec 22;48(6):933-47
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3639931
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Gene symbol:
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Msx1
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Gene name:
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msh homeobox 1
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Probe:
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Msx1 probe15
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Probe preparation:
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labelled with digoxigenin RNA
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Results
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Specimen
7A:
embryonic day 10.5
(more  )
Specimen
7A:
(close  )
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Genetic Background:
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involves: 129S4/SvJaeSor * C57BL/6J
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Age:
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embryonic day 10.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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Specimen
7E:
(close )
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Genetic Background:
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involves: 129S4/SvJaeSor * C57BL/6J
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 10.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: hindbrain |
Present |
Regionally restricted |
7E
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Expression was detected in the lower rhombic lip as in wild type.
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| TS17: hindbrain roof plate |
Present |
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7E
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Expression was detected as in wild type.
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Specimen
7B:
embryonic day 11.5
(more )
Specimen
7B:
(close )
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Genetic Background:
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involves: 129S4/SvJaeSor * C57BL/6J
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Age:
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embryonic day 11.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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Specimen
7F:
(close )
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Genetic Background:
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involves: 129S4/SvJaeSor * C57BL/6J
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 11.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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Specimen
7C:
embryonic day 12.5
(more )
Specimen
7C:
(close )
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Genetic Background:
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involves: 129S4/SvJaeSor * C57BL/6J
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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Specimen
7G:
(close )
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Genetic Background:
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involves: 129S4/SvJaeSor * C57BL/6J
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: hindbrain |
Present |
Regionally restricted |
7G
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Expression was decreased in the lower rhombic lip in mutant compared to wild type.
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| TS20: hindbrain roof |
Present |
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7G
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Specimen
7D:
embryonic day 11.5
(more )
Specimen
7D:
(close )
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Genetic Background:
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involves: 129S4/SvJaeSor * C57BL/6J
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Age:
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embryonic day 11.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: neural tube |
Present |
Regionally restricted |
7D
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Expression was detected in dorsal spinal neural tube.
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Specimen
7H:
(close )
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Genetic Background:
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involves: 129S4/SvJaeSor * C57BL/6J
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Mutant Allele(s):
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Pax6Sey/Pax6Sey
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Age:
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embryonic day 11.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: neural tube |
Present |
Regionally restricted |
7H
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Expression was detected in dorsal spinal neural tube as in wild type.
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Analysis Tools