Gene Expression Data
Assay Details
|
Assay
|
|
Reference:
|
J:107595
Landsberg RL, et al., Hindbrain rhombic lip is comprised of discrete progenitor cell populations allocated by Pax6. Neuron. 2005 Dec 22;48(6):933-47
|
|
Assay type:
|
RNA in situ
|
|
MGI Accession ID:
|
MGI:3639916
|
|
Gene symbol:
|
Barhl1
|
|
Gene name:
|
BarH like homeobox 1
|
|
|
Results
|
Specimen
6A and inset:
embryonic day 12.5
(more  )
Note: Inset is a lower magnification view.
Specimen
6A and inset:
(close  )
|
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6J
|
|
Age:
|
embryonic day 12.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Inset is a lower magnification view.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: brainstem |
Present |
Regionally restricted |
6A
|
Expression was detected in mossy fiber neurons in the extramural migratory stream.
|
Specimen
6E and inset:
embryonic day 12.5; Pax6Sey/ Pax6Sey
(more )
Note: Inset is a lower magnification view.
Specimen
6E and inset:
(close )
|
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6J
|
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
|
Age:
|
embryonic day 12.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Inset is a lower magnification view.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: brainstem |
Weak |
Regionally restricted |
6E
|
Expression was decreased in mossy fiber neurons in the extramural migratory stream of the mutant.
|
Specimen
6B:
embryonic day 14.5
(more )
Specimen
6B:
(close )
|
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6J
|
|
Age:
|
embryonic day 14.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS22: brainstem |
Present |
Regionally restricted |
6B
|
Expression was detected in mossy fiber neurons in the extramural migratory stream.
|
Specimen
6F:
(close )
|
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6J
|
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
|
Age:
|
embryonic day 14.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS22: brainstem |
Weak |
Regionally restricted |
6F
|
Expression was decreased in mossy fiber neurons in the extramural migratory stream of the mutant.
|
Specimen
6C:
embryonic day 16.5
(more )
Specimen
6C:
(close )
|
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6J
|
|
Age:
|
embryonic day 16.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: brainstem |
Present |
Regionally restricted |
6C
|
Expression was detected in mossy fiber neurons in the mature nuclei.
|
Specimen
6G:
(close )
|
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6J
|
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
|
Age:
|
embryonic day 16.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: brainstem |
Weak |
Regionally restricted |
6G
|
Expression was decreased in mossy fiber neurons in the mature nuclei of the mutant.
|
Specimen
6D:
embryonic day 16.5
(more )
Specimen
6D:
(close )
|
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6J
|
|
Age:
|
embryonic day 16.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: brainstem |
Present |
Regionally restricted |
6D
|
Expression was detected in mossy fiber neurons in the mature nuclei.
|
Specimen
6H:
(close )
|
Genetic Background:
|
involves: 129S4/SvJaeSor * C57BL/6J
|
|
Mutant Allele(s):
|
Pax6Sey/Pax6Sey
|
|
Age:
|
embryonic day 16.5
|
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Embedding:
|
Cryosection
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: brainstem |
Weak |
Regionally restricted |
6H
|
Expression was decreased in mossy fiber neurons in the mature nuclei of the mutant.
|
|
Analysis Tools