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Gene Expression Data
Assay Details
Assay
Reference: J:103446 McKee AE, et al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev Biol. 2005 Jul 20;5:14
Assay type: RNA in situ
MGI Accession ID: MGI:3618151
Gene symbol: Sf1
Gene name: splicing factor 1
Probe: cw17 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The results of this assay were listed in Additional File 3, cw17.
Results
Specimen E13.5: embryonic day 13.5 (more )
Note: Authors indicate that there was either ubiquitous expression that is difficult to distinguish from background, or no expression. The authors observed uneven signals in different brain regions and annotated some structures as "Present".
Structure Level Pattern Image Note
TS21: cerebral cortex Present R0061-11 , R0061-12 Expression was detected in precortical tissue.
TS21: brain ventricular layer Present R0061-12 , R0061-11
TS21: central nervous system ganglion Present R0061-12 , R0061-11
TS21: corpus striatum Present R0061-12 , R0061-11
TS21: hindbrain Present R0061-12 , R0061-11
TS21: olfactory epithelium Present R0061-12 , R0061-11
TS21: retina Present R0061-12 , R0061-11
TS21: spinal cord Present R0061-12 , R0061-11
Specimen P0: postnatal day 0 (more )
Note: Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
Structure Level Pattern Image Note
TS27: cerebral cortex Present R0061-22 , R0061-23 , R0061-21
TS27: hindbrain Present R0061-22 , R0061-23 , R0061-21
TS27: hippocampus Present R0061-22 , R0061-23 , R0061-21
TS27: hypothalamus Present R0061-22 , R0061-23 , R0061-21
TS27: main olfactory bulb Present R0061-22 , R0061-23 , R0061-21
TS27: midbrain Present R0061-22 , R0061-23 , R0061-21
TS27: olfactory epithelium Present R0061-22 , R0061-23 , R0061-21
TS27: retina Present R0061-22 , R0061-23 , R0061-21
TS27: thalamus Present R0061-22 , R0061-23 , R0061-21
TS27: corpus striatum Ambiguous R0061-21 , R0061-22 , R0061-23 Authors indicate that there was either ubiquitous or background expression.
TS27: spinal cord Ambiguous R0061-21 , R0061-22 , R0061-23 Authors indicate that there was either ubiquitous or background expression.
TS27: trigeminal ganglion Ambiguous R0061-21 , R0061-22 , R0061-23 Authors indicate that there was either ubiquitous or background expression.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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