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Gene Expression Data
Assay Details
Assay
Reference: J:103446 McKee AE, et al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev Biol. 2005 Jul 20;5:14
Assay type: RNA in situ
MGI Accession ID: MGI:3618132
Gene symbol: Fxr1
Gene name: FMR1 autosomal homolog 1
Probe: Fxr1 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The results of this assay were listed in Additional File 3, Fxr1.
Results
Specimen E13.5: embryonic day 13.5 (more )
Note: Authors indicate that there was either ubiquitous expression that is difficult to distinguish from background, or no expression. The authors observed uneven signals in different brain regions and annotated some structures as "Present".
Structure Level Pattern Image Note
TS21: cerebral cortex Present R0083-11 , R0083-12 Expression was detected in precortical tissue.
TS21: brain ventricular layer Present R0083-11 , R0083-12
TS21: central nervous system ganglion Present R0083-11 , R0083-12
TS21: corpus striatum Present R0083-11 , R0083-12
TS21: hindbrain Present R0083-11 , R0083-12
TS21: olfactory epithelium Present R0083-11 , R0083-12
TS21: retina Present R0083-11 , R0083-12
TS21: spinal cord Present R0083-11 , R0083-12

Specimen P0: postnatal day 0 (more )
Note: Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
Structure Level Pattern Image Note
TS27: cerebral cortex Present R0083-21 , R0083-22 , R0083-23
TS27: hindbrain Present R0083-21 , R0083-22 , R0083-23
TS27: hippocampus Present R0083-21 , R0083-22 , R0083-23
TS27: hypothalamus Present R0083-21 , R0083-22 , R0083-23
TS27: main olfactory bulb Present R0083-21 , R0083-22 , R0083-23
TS27: midbrain Present R0083-21 , R0083-22 , R0083-23
TS27: olfactory epithelium Present R0083-21 , R0083-22 , R0083-23
TS27: retina Present R0083-21 , R0083-22 , R0083-23
TS27: spinal cord Present R0083-21 , R0083-22 , R0083-23
TS27: thalamus Present R0083-21 , R0083-22 , R0083-23
TS27: trigeminal ganglion Present R0083-21 , R0083-22 , R0083-23
TS27: corpus striatum Ambiguous R0083-23 , R0083-22 , R0083-21 Authors indicate that there was either ubiquitous or background expression.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory