About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:103446 McKee AE, et al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev Biol. 2005 Jul 20;5:14
Assay type: RNA in situ
MGI Accession ID: MGI:3618130
Gene symbol: Fmr1
Gene name: fragile X messenger ribonucleoprotein 1
Probe: Fmr1 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The results of this assay were listed in Additional File 3, Fmr1.
Results
Specimen E13.5: embryonic day 13.5 (more )
Note: Authors indicate that there was either ubiquitous expression that is difficult to distinguish from background, or no expression. The authors observed uneven signals in different brain regions and annotated some structures as "Present".
Structure Level Pattern Image Note
TS21: cerebral cortex Present R0071-11 , R0071-12 Expression was detected in precortical tissue.
TS21: brain ventricular layer Present R0071-11 , R0071-12
TS21: central nervous system ganglion Present R0071-11 , R0071-12
TS21: corpus striatum Present R0071-11 , R0071-12
TS21: hindbrain Present R0071-11 , R0071-12
TS21: olfactory epithelium Present R0071-11 , R0071-12
TS21: retina Present R0071-11 , R0071-12
TS21: spinal cord Present R0071-11 , R0071-12

Specimen P0: postnatal day 0 (more )
Note: Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
Structure Level Pattern Image Note
TS27: cerebral cortex Present R0071-23 , R0071-21 , R0071-22
TS27: hindbrain Present R0071-23 , R0071-21 , R0071-22
TS27: hippocampus Present R0071-23 , R0071-21 , R0071-22
TS27: hypothalamus Present R0071-23 , R0071-21 , R0071-22
TS27: main olfactory bulb Present R0071-23 , R0071-21 , R0071-22
TS27: midbrain Present R0071-23 , R0071-21 , R0071-22
TS27: olfactory epithelium Present R0071-23 , R0071-21 , R0071-22
TS27: retina Present R0071-23 , R0071-21 , R0071-22
TS27: spinal cord Present R0071-23 , R0071-21 , R0071-22
TS27: thalamus Present R0071-23 , R0071-21 , R0071-22
TS27: trigeminal ganglion Present R0071-23 , R0071-21 , R0071-22
TS27: corpus striatum Ambiguous R0071-23 , R0071-21 , R0071-22 Authors indicate that there was either ubiquitous or background expression.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory