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Gene Expression Data
Assay Details
Assay
Reference: J:103446 McKee AE, et al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev Biol. 2005 Jul 20;5:14
Assay type: RNA in situ
MGI Accession ID: MGI:3617443
Gene symbol: Sf3a1
Gene name: splicing factor 3a, subunit 1
Probe: Sf3a1 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The results of this assay were listed in Additional File 3, row Sf3a1.
Results
Specimen E13.5: embryonic day 13.5 (more )
Note: Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
Structure Level Pattern Image Note
TS21: cerebral cortex Present R3691-11 Expression was detected in precortical tissue.
TS21: central nervous system ganglion Present R3691-11
TS21: olfactory epithelium Present R3691-11
TS21: retina Present R3691-11
TS21: brain ventricular layer Ambiguous R3691-11 Authors indicate that there was either ubiquitous or background expression.
TS21: corpus striatum Ambiguous R3691-11 Authors indicate that there was either ubiquitous or background expression.
TS21: hindbrain Ambiguous R3691-11 Authors indicate that there was either ubiquitous or background expression.
TS21: spinal cord Ambiguous R3691-11 Authors indicate that there was either ubiquitous or background expression.
Specimen P0: postnatal day 0 (more )
Note: Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
Structure Level Pattern Image Note
TS27: cerebral cortex Present R3691-21 , R3691-22
TS27: hippocampus Present R3691-21 , R3691-22
TS27: olfactory epithelium Present R3691-21 , R3691-22
TS27: retina Present R3691-21 , R3691-22
TS27: hindbrain Ambiguous R3691-21 , R3691-22 Authors indicate that there was either ubiquitous or background expression.
TS27: main olfactory bulb Ambiguous R3691-21 , R3691-22 Authors indicate that there was either ubiquitous or background expression.
TS27: midbrain Ambiguous R3691-21 , R3691-22 Authors indicate that there was either ubiquitous or background expression.
TS27: corpus striatum Absent R3691-21 , R3691-22
TS27: hypothalamus Absent R3691-21 , R3691-22
TS27: spinal cord Absent R3691-21 , R3691-22
TS27: thalamus Absent R3691-21 , R3691-22
TS27: trigeminal ganglion Absent R3691-21 , R3691-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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