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Gene Expression Data
Assay Details
Assay
Reference: J:103446 McKee AE, et al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev Biol. 2005 Jul 20;5:14
Assay type: RNA in situ
MGI Accession ID: MGI:3617215
Gene symbol: Slc6a8
Gene name: solute carrier family 6 (neurotransmitter transporter, creatine), member 8
Probe: Slc6a8 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The results of this assay were listed in Additional File 3, row Slc6a8.
Results
Specimen E13.5: embryonic day 13.5 (more )
Note: Authors indicate that there was either ubiquitous expression that is difficult to distinguish from background, or no expression. The authors observed uneven signals in different brain regions and annotated some structures as "Present".
Structure Level Pattern Image Note
TS21: cerebral cortex Absent R3301-11 Expression was absent in precortical tissue.
TS21: brain ventricular layer Absent R3301-11
TS21: central nervous system ganglion Absent R3301-11
TS21: corpus striatum Absent R3301-11
TS21: hindbrain Absent R3301-11
TS21: olfactory epithelium Absent R3301-11
TS21: retina Absent R3301-11
TS21: spinal cord Absent R3301-11
Specimen P0: postnatal day 0 (more )
Note: Authors indicate that there was either ubiquitous expression that is difficult to distinguish from background, or no expression. The authors observed uneven signals in different brain regions and annotated some structures as "Present".
Structure Level Pattern Image Note
TS27: cerebral cortex Present R3301-21 , R3301-22
TS27: corpus striatum Present R3301-21 , R3301-22
TS27: hippocampus Present R3301-21 , R3301-22
TS27: midbrain Ambiguous R3301-22 , R3301-21 Authors indicate that there was either ubiquitous or background expression.
TS27: retina Ambiguous R3301-22 , R3301-21 Authors indicate that there was either ubiquitous or background expression.
TS27: hindbrain Absent R3301-21 , R3301-22
TS27: hypothalamus Absent R3301-21 , R3301-22
TS27: main olfactory bulb Absent R3301-21 , R3301-22
TS27: olfactory epithelium Absent R3301-21 , R3301-22
TS27: spinal cord Absent R3301-21 , R3301-22
TS27: thalamus Absent R3301-21 , R3301-22
TS27: trigeminal ganglion Absent R3301-21 , R3301-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory