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Gene Expression Data
Assay Details
Assay
Reference: J:103446 McKee AE, et al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev Biol. 2005 Jul 20;5:14
Assay type: RNA in situ
MGI Accession ID: MGI:3617166
Gene symbol: Lsm6
Gene name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Probe: Lsm6 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The results of this assay were listed in Additional File 3, row Lsm6.
Results
Specimen E13.5: embryonic day 13.5 (more )
Note: Authors indicate that there was either ubiquitous expression that is difficult to distinguish from background, or no expression.
Structure Level Pattern Image Note
TS21: cerebral cortex Ambiguous R3972-11 Authors indicate that there was either ubiquitous or background expression in precortical tissue.
TS21: brain ventricular layer Ambiguous R3972-11 Authors indicate that there was either ubiquitous or background expression.
TS21: central nervous system ganglion Ambiguous R3972-11 Authors indicate that there was either ubiquitous or background expression.
TS21: corpus striatum Ambiguous R3972-11 Authors indicate that there was either ubiquitous or background expression.
TS21: hindbrain Ambiguous R3972-11 Authors indicate that there was either ubiquitous or background expression.
TS21: olfactory epithelium Ambiguous R3972-11 Authors indicate that there was either ubiquitous or background expression.
TS21: retina Ambiguous R3972-11 Authors indicate that there was either ubiquitous or background expression.
TS21: spinal cord Ambiguous R3972-11 Authors indicate that there was either ubiquitous or background expression.
Specimen P0: postnatal day 0 (more )
Note: Authors indicate that there was either ubiquitous expression that is difficult to distinguish from background, or no expression.
Structure Level Pattern Image Note
TS27: midbrain Ambiguous R3972-21 , R3972-22 Authors indicate that there was either ubiquitous or background expression.
TS27: cerebral cortex Absent R3972-21 , R3972-22
TS27: corpus striatum Absent R3972-21 , R3972-22
TS27: hindbrain Absent R3972-21 , R3972-22
TS27: hippocampus Absent R3972-21 , R3972-22
TS27: hypothalamus Absent R3972-21 , R3972-22
TS27: main olfactory bulb Absent R3972-21 , R3972-22
TS27: olfactory epithelium Absent R3972-21 , R3972-22
TS27: retina Absent R3972-21 , R3972-22
TS27: spinal cord Absent R3972-21 , R3972-22
TS27: thalamus Absent R3972-21 , R3972-22
TS27: trigeminal ganglion Absent R3972-21 , R3972-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory