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Gene Expression Data
Assay Details
Assay
Reference: J:102861 Pruunsild P, et al., Structure, alternative splicing, and expression of the human and mouse KCNIP gene family. Genomics. 2005 Nov;86(5):581-93
Assay type: RNA in situ
MGI Accession ID: MGI:3610971
Gene symbol: Kcnip4
Gene name: Kv channel interacting protein 4
Probe: Kcnip4 cDNA1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Expression data are summarized in Table 1 (see below) which is located in the supplemental material of the reference.
Results
Specimen 4D: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present 4D
TS28: cortical layer III Present 4D
TS28: cortical layer IV Present 4D
TS28: cortical layer V Present 4D
TS28: cortical layer VI Present 4D
TS28: main olfactory bulb glomerular layer Present 4D
TS28: main olfactory bulb mitral cell layer Present 4D
TS28: accumbens nucleus Weak 4D
TS28: caudate-putamen Weak 4D
TS28: thalamus Strong Regionally restricted 4D Expression is in most nuclei.
TS28: pallidum Weak Regionally restricted 4D Expression was weak in ventral pallidum.

Specimen 4H: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb glomerular layer Present 4H
TS28: main olfactory bulb mitral cell layer Present 4H

Specimen 4L: postnatal adult (more )
Structure Level Pattern Image Note
TS28: piriform cortex Strong 4L
TS28: accumbens nucleus Weak 4L
TS28: caudate-putamen Weak 4L
TS28: pallidum Weak 4L

Specimen 4P: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Strong 4P
TS28: hippocampus CA1 Strong 4P
TS28: hippocampus CA2 Strong 4P
TS28: hippocampus CA3 Present 4P
TS28: thalamus Strong Regionally restricted 4P Expression is in most nuclei.

Specimen 5S: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: spinal cord Moderate 5S
TS27: dorsal root ganglion Strong 5S

Specimen 5T: postnatal adult (more )
Structure Level Pattern Image Note
TS28: spinal cord Moderate 5T

Specimen 5U,V: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dorsal root ganglion Strong Regionally restricted 5U , 5V Expression is in the majority of neurons.

Specimen 5W,X: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present 5W , 5X
TS28: cortical layer III Present 5W , 5X
TS28: cortical layer IV Present 5W , 5X
TS28: cortical layer V Present 5W , 5X
TS28: cortical layer VI Present 5W , 5X

Specimen Table 1: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Strong
TS28: cerebellum granule cell layer Strong
TS28: dentate gyrus granule cell layer Strong
TS28: dorsal root ganglion Strong
TS28: hippocampus CA1 Strong
TS28: hippocampus CA2 Strong
TS28: hippocampus CA3 Strong
TS28: lateral habenular nucleus Strong
TS28: main olfactory bulb glomerular layer Strong
TS28: main olfactory bulb mitral cell layer Strong
TS28: mammillary body Strong
TS28: medial preoptic nucleus Strong
TS28: medial vestibular nucleus Strong
TS28: parafascicular nucleus Strong
TS28: thalamus Strong Regionally restricted Expression is in most nuclei.
TS28: anterior olfactory nucleus Moderate
TS28: cortical layer II Moderate
TS28: cortical layer III Moderate
TS28: cortical layer IV Moderate
TS28: cortical layer V Moderate
TS28: cortical layer VI Moderate
TS28: dorsomedial hypothalamic nucleus Moderate
TS28: inferior colliculus Moderate
TS28: piriform cortex Moderate
TS28: pontine nucleus Moderate
TS28: spinal cord dorsal horn Moderate
TS28: spinal cord ventral horn Moderate
TS28: superior colliculus Moderate
TS28: ventromedial hypothalamic nucleus Moderate
TS28: accumbens nucleus Weak
TS28: amygdala Weak
TS28: caudate-putamen Weak
TS28: cuneate nucleus Weak
TS28: medial habenular nucleus Weak
TS28: pallidum Weak Regionally restricted Expression is in the ventral pallidum.
TS28: telencephalon Weak Regionally restricted Expression is in the lateral and medial septum and is absent in the interstitial nucleus of the posterior limb of the anterior commissure.
TS28: cerebellum molecular layer Absent
TS28: gigantocellular reticular nucleus Absent
TS28: globus pallidus Absent
TS28: main olfactory bulb granule cell layer Absent
TS28: reticular thalamic nucleus Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory