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Gene Expression Data
Assay Details
Assay
Reference: J:102861 Pruunsild P, et al., Structure, alternative splicing, and expression of the human and mouse KCNIP gene family. Genomics. 2005 Nov;86(5):581-93
Assay type: RNA in situ
MGI Accession ID: MGI:3610970
Gene symbol: Kcnip3
Gene name: Kv channel interacting protein 3, calsenilin
Probe: Kcnip3 cDNA1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Expression data are summarized in Table 1 (see below) which is located in the supplemental material of the reference.
Results
Specimen 4C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present 4C
TS28: cortical layer III Present 4C
TS28: cortical layer IV Present 4C
TS28: cortical layer V Present 4C
TS28: cortical layer VI Present 4C
TS28: dentate gyrus granule cell layer Present 4C
TS28: dorsal thalamus Present 4C
TS28: main olfactory bulb glomerular layer Present 4C
TS28: main olfactory bulb mitral cell layer Present 4C
TS28: hippocampus CA1 Weak 4C
TS28: hippocampus CA2 Weak 4C
TS28: hippocampus CA3 Weak 4C
TS28: accumbens nucleus Moderate 4C
TS28: caudate-putamen Moderate 4C
TS28: pallidum Moderate Regionally restricted 4C Expression was moderate in ventral pallidum.

Specimen 4G: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb glomerular layer Present 4G
TS28: main olfactory bulb mitral cell layer Present 4G

Specimen 4K: postnatal adult (more )
Structure Level Pattern Image Note
TS28: piriform cortex Strong 4K
TS28: accumbens nucleus Moderate 4K
TS28: caudate-putamen Moderate 4K
TS28: pallidum Moderate 4K

Specimen 4O: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present 4O
TS28: dorsal thalamus Present 4O
TS28: hippocampus CA1 Weak 4O
TS28: hippocampus CA2 Weak 4O
TS28: hippocampus CA3 Weak 4O

Specimen 5M: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: spinal cord Moderate 5M
TS27: dorsal root ganglion Strong 5M

Specimen 5N: postnatal adult (more )
Structure Level Pattern Image Note
TS28: spinal cord Moderate 5N

Specimen 5O,P: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dorsal root ganglion Strong Regionally restricted 5P , 5O Expression is in the majority of neurons.

Specimen 5Q,R: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present 5Q , 5R
TS28: cortical layer III Present 5Q , 5R
TS28: cortical layer IV Present 5Q , 5R
TS28: cortical layer V Present 5Q , 5R
TS28: cortical layer VI Present 5Q , 5R

Specimen Table 1: postnatal adult (more )
Structure Level Pattern Image Note
TS28: amygdala Strong
TS28: anterior olfactory nucleus Strong
TS28: cortical layer II Strong
TS28: cortical layer III Strong
TS28: cortical layer IV Strong
TS28: cortical layer V Strong
TS28: cortical layer VI Strong
TS28: dentate gyrus granule cell layer Strong
TS28: dorsal root ganglion Strong
TS28: main olfactory bulb glomerular layer Strong
TS28: main olfactory bulb mitral cell layer Strong
TS28: piriform cortex Strong
TS28: accumbens nucleus Moderate
TS28: caudate-putamen Moderate
TS28: hippocampus CA1 Moderate
TS28: hippocampus CA2 Moderate
TS28: hippocampus CA3 Moderate
TS28: inferior colliculus Moderate
TS28: mammillary body Moderate
TS28: medial habenular nucleus Moderate
TS28: parafascicular nucleus Moderate
TS28: pontine nucleus Moderate
TS28: spinal cord dorsal horn Moderate
TS28: spinal cord ventral horn Moderate
TS28: gigantocellular reticular nucleus Moderate Regionally restricted Present in ventral, absent in alpha.
TS28: cerebellum molecular layer Moderate Single cells Expression is in scattered neurons.
TS28: cuneate nucleus Weak
TS28: dorsomedial hypothalamic nucleus Weak
TS28: superior colliculus Weak
TS28: ventromedial hypothalamic nucleus Weak
TS28: thalamus Weak Regionally restricted Expression is in the mediodorsal nucleus and in other nuclei.
TS28: telencephalon Weak Regionally restricted Expression is in the lateral septum and in the interstitial nucleus of the posterior limb of the anterior commissure.
TS28: cerebellum Purkinje cell layer Absent
TS28: cerebellum granule cell layer Absent
TS28: globus pallidus Absent
TS28: lateral habenular nucleus Absent
TS28: main olfactory bulb granule cell layer Absent
TS28: medial preoptic nucleus Absent
TS28: medial vestibular nucleus Absent
TS28: reticular thalamic nucleus Absent
TS28: pallidum Absent Absent in the ventral pallidum.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory