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Gene Expression Data
Assay Details
Assay
Reference: J:102861 Pruunsild P, et al., Structure, alternative splicing, and expression of the human and mouse KCNIP gene family. Genomics. 2005 Nov;86(5):581-93
Assay type: RNA in situ
MGI Accession ID: MGI:3610968
Gene symbol: Kcnip1
Gene name: Kv channel-interacting protein 1
Probe: Kcnip1 cDNA1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Expression data are summarized in Table 1 (see below) which is located in the supplemental material of the reference.
Results
Specimen 4A: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb granule cell layer Strong 4A
TS28: hippocampus region Strong Single cells 4A Expression is in scattered neurons around the CA regions.
TS28: accumbens nucleus Strong Single cells 4A Expression is in scattered neurons.
TS28: basal ganglia Strong Single cells 4A Expression is in scattered neurons.
TS28: caudate-putamen Strong Single cells 4A Expression is in scattered neurons.
TS28: dentate gyrus Strong Single cells 4A Expression is in scattered neurons.
TS28: hippocampus molecular layer Strong Single cells 4A Expression is in scattered neurons.
TS28: pallidum Strong Single cells 4A Expression is in scattered neurons.
TS28: cortical layer II Present 4A
TS28: cortical layer III Present 4A
TS28: cortical layer IV Present 4A
TS28: cortical layer V Present 4A
TS28: cortical layer VI Present 4A

Specimen 4E: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb granule cell layer Strong 4E

Specimen 4I: postnatal adult (more )
Structure Level Pattern Image Note
TS28: accumbens nucleus Strong Single cells 4I Expression is in scattered neurons.
TS28: basal ganglia Strong Single cells 4I Expression is in scattered neurons.
TS28: caudate-putamen Strong Single cells 4I Expression is in scattered neurons.
TS28: pallidum Strong Single cells 4I Expression is in scattered neurons.
TS28: cortical layer II Present Single cells 4I Expression is in scattered neurons.
TS28: cortical layer III Present Single cells 4I Expression is in scattered neurons.
TS28: cortical layer IV Present Single cells 4I Expression is in scattered neurons.
TS28: cortical layer V Present Single cells 4I Expression is in scattered neurons.
TS28: cortical layer VI Present Single cells 4I Expression is in scattered neurons.
TS28: piriform cortex Absent 4I

Specimen 4M: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus region Strong Single cells 4M Expression is in scattered neurons around the CA regions.
TS28: dentate gyrus Strong Single cells 4M Expression is in scattered neurons.
TS28: hippocampus molecular layer Strong Single cells 4M Expression is in scattered neurons.

Specimen 5A: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: spinal cord Strong 5A
TS27: dorsal root ganglion Moderate 5A

Specimen 5B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: spinal cord Strong 5B

Specimen 5C,D: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dorsal root ganglion Moderate Regionally restricted 5C , 5D Expression is in a small subpopulation.

Specimen 5E,F: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer II Present 5E , 5F
TS28: cortical layer III Present 5E , 5F
TS28: cortical layer IV Present 5E , 5F
TS28: cortical layer V Present 5E , 5F
TS28: cortical layer VI Present 5E , 5F

Specimen Table 1: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Strong
TS28: dorsomedial hypothalamic nucleus Strong
TS28: main olfactory bulb granule cell layer Strong
TS28: medial habenular nucleus Strong
TS28: reticular thalamic nucleus Strong
TS28: spinal cord dorsal horn Strong
TS28: ventromedial hypothalamic nucleus Strong
TS28: accumbens nucleus Strong Single cells Expression is in scattered neurons.
TS28: caudate-putamen Strong Single cells Expression is in scattered neurons.
TS28: cortical layer II Strong Single cells Expression is in scattered neurons.
TS28: cortical layer III Strong Single cells Expression is in scattered neurons.
TS28: cortical layer IV Strong Single cells Expression is in scattered neurons.
TS28: cortical layer V Strong Single cells Expression is in scattered neurons.
TS28: cortical layer VI Strong Single cells Expression is in scattered neurons.
TS28: dentate gyrus granule cell layer Strong Single cells Expression is in scattered neurons.
TS28: hippocampus CA1 Strong Single cells Expression is in scattered neurons.
TS28: hippocampus CA2 Strong Single cells Expression is in scattered neurons.
TS28: hippocampus CA3 Strong Single cells Expression is in scattered neurons.
TS28: pallidum Strong Single cells Expression is in scattered neurons in the ventral pallidum.
TS28: cuneate nucleus Moderate
TS28: dorsal root ganglion Moderate
TS28: medial preoptic nucleus Moderate
TS28: parafascicular nucleus Moderate
TS28: spinal cord ventral horn Moderate
TS28: telencephalon Moderate Regionally restricted Expression is in the lateral and medial septum and is absent in the interstitial nucleus of the posterior limb of the anterior commissure.
TS28: mammillary body Moderate Regionally restricted Expression is in the premammillary nucleus and is absent in the mammillary nucleus.
TS28: thalamus Moderate Regionally restricted Expression is in the mediodorsal nucleus.
TS28: anterior olfactory nucleus Weak
TS28: inferior colliculus Weak
TS28: superior colliculus Weak
TS28: amygdala Absent
TS28: cerebellum granule cell layer Absent
TS28: cerebellum molecular layer Absent
TS28: gigantocellular reticular nucleus Absent
TS28: globus pallidus Absent
TS28: lateral habenular nucleus Absent
TS28: main olfactory bulb glomerular layer Absent
TS28: main olfactory bulb mitral cell layer Absent
TS28: medial vestibular nucleus Absent
TS28: piriform cortex Absent
TS28: pontine nucleus Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory