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Gene Expression Data
Assay Details
Assay
Reference: J:99372 van der Zwaag B, et al., Identifying new candidate genes for hereditary facial paresis on chromosome 3q21-q22 by RNA in situ hybridization in mouse. Genomics. 2005 Jul;86(1):55-67
Assay type: RNA in situ
MGI Accession ID: MGI:3605538
Gene symbol: Podxl2
Gene name: podocalyxin-like 2
Probe: Podxl2 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde. The author divided the genes analyzed in this publication into 4 groups based on their expression patterns. The expression pattern of this gene was placed in group 4 (See Table 1).
Results
Specimen 6A, 6B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebellum primordium Present Regionally restricted 6A , 6B Expression was detected in the dorsal cells of the cerebellar primordium.
TS20: spinal cord Present 6A , 6B
TS20: medulla oblongata Present Regionally restricted 6B , 6A Expression was detected in the anterior part of the medulla oblongata but was absent from the neuroepithelium.
TS20: hindbrain Present Regionally restricted 6A , 6B Expression was detected in the neuroepithelium.
TS20: midbrain Present Regionally restricted 6B , 6A Expression was detected in the neuroepithelium.
TS20: central nervous system Present Regionally restricted 6A , 6B Expression was detected in the neuroepithelium of the midbrain and hindbrain, other regions of the central nervous system were void of expression in the neuroepithelium.

Specimen 6C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: peripheral nervous system Present 6C
TS22: cranial ganglion Present 6C
TS22: facial ganglion Present 6C
TS22: facial nerve Present 6C

Specimen 6D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: gut Present Regionally restricted 6D Expression was detected in the gut wall smooth muscle cells.

Specimen 6E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: olfactory epithelium Present 6E

Specimen 6F: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: renal cortex Present 6F

Specimen 6G: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: brain Present 6G
TS26: olfactory lobe Present Regionally restricted 6G Expression was detected in the olfactory bulb.
TS26: cerebral cortex Present Regionally restricted 6G Expression was detected in some layers.
TS26: cerebellum Present 6G

Specimen not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: central nervous system Present
TS20: peripheral nervous system Present
TS20: retina Present

Specimen not shown: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: central nervous system Present
TS22: peripheral nervous system Present
TS22: renal cortex Present
TS22: retina Present
TS22: intestine Present Regionally restricted Expression was detected in smooth muscle cells.
TS22: stomach Present Regionally restricted Expression was detected in smooth muscle cells.
TS22: tongue Present Regionally restricted Expression was detected in smooth muscle cells.
TS22: respiratory tract Present Regionally restricted Expression was detected in smooth muscle cells of bronchi.

Specimen not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: central nervous system Present
TS24: peripheral nervous system Present
TS24: retina Present

Specimen not shown: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: central nervous system Present
TS26: peripheral nervous system Present
TS26: retina Present


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory