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Gene Expression Data
Assay Details
Assay
Reference: J:99372 van der Zwaag B, et al., Identifying new candidate genes for hereditary facial paresis on chromosome 3q21-q22 by RNA in situ hybridization in mouse. Genomics. 2005 Jul;86(1):55-67
Assay type: RNA in situ
MGI Accession ID: MGI:3605532
Gene symbol: Chst13
Gene name: carbohydrate sulfotransferase 13
Probe: Chst13 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde. The author divided the genes analyzed in this publication into 4 groups based on their expression patterns. The expression pattern of this gene was placed in group 3 (See Table 1).
Results
Specimen 2A: embryonic day 14.5 (more )
Note: The specimen was the lower half of the embryo.
Structure Level Pattern Image Note
TS22: metanephros Present Regionally restricted 2A Expression was detected in clusters of cells.
Specimen 2B: embryonic day 14.5 (more )
Note: The specimen was the head.
Structure Level Pattern Image Note
TS22: lower jaw Present 2B
TS22: upper jaw Present 2B
TS22: facial bone primordium Present Regionally restricted 2B Expression was detected in the eye socket.
TS22: cranium Present Regionally restricted 2B Expression was detected in the base of the skull.
TS22: rib cartilage condensation Present Regionally restricted 2B Expression was detected in the dorsal part of the ribs.
Specimen not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: liver Present
Specimen not shown: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: liver Absent
TS26: lower jaw Present
TS26: upper jaw Present
TS26: upper jaw incisor Present Regionally restricted Expression was detected in the odontoblasts.
TS26: cranium Present Regionally restricted Expression was detected in the base of the skull.
TS26: renal cortex Present
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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