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Gene Expression Data
Assay Details
Assay
Reference: J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
Assay type: RNA in situ
MGI Accession ID: MGI:3585828
Gene symbol: Rtn1
Gene name: reticulon 1
Probe: IMAGE clone 3155323
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: This data is from Supplemental Table 5, Gene column, row: 29075 reticulon 1. After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde prior to processing.
Results
Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: retina inner nuclear layer Present Expression was detected in the inner neuroblastic layer.
Specimen P0/1: postnatal day 0-1 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Present Regionally restricted Expression was detected in the vitreal inner neuroblastic layer.
Specimen P2/3: postnatal day 2-3 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Present Regionally restricted Expression was detected in the vitreal inner neuroblastic layer.
Specimen P4/5: postnatal day 4-5 (more )
Structure Level Pattern Image Note
TS28: retina inner nuclear layer Present Regionally restricted Submitted Image - v1P5.5 , Submitted Image - v1P4.5 Expression was detected in the vitreal inner neuroblastic layer.
TS28: retina outer nuclear layer Present Regionally restricted Submitted Image - v1P5.5 , Submitted Image - v1P4.5 Expression was detected in a small subset of cells in the vitreal outer neuroblastic layer.
Specimen P6/7: postnatal day 6-7 (more )
Structure Level Pattern Image Note
TS28: retina ganglion cell layer Present Submitted Image - v1P7.5
TS28: retina layer Present Regionally restricted Submitted Image - v1P7.5 Expression was detected in amacrine cells.
Specimen P8/10: postnatal day 8-10 (more )
Structure Level Pattern Image Note
TS28: retina ganglion cell layer Present Submitted Image - v1P10.5
TS28: retina layer Present Regionally restricted Submitted Image - v1P10.5 Expression was detected in amacrine cells.
Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina ganglion cell layer Present Regionally restricted Submitted Image - v1Adult Expression was detected in a subset of ganglion cells.
Specimen CNS: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: central nervous system Present Expression was widespread.
Specimen Embryo: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: central nervous system Present
TS24: peripheral nervous system Present
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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