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Gene Expression Data
Assay Details
Assay
Reference: J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
Assay type: RNA in situ
MGI Accession ID: MGI:3585431
Gene symbol: Cdhr1
Gene name: cadherin-related family member 1
Probe: UI-M-BH0-ajo-h-06-0-UI.s1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: This data is from Supplemental Table 5, Gene column, row: 156506 Photoreceptor cadherin . After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde prior to processing.
Results
Specimen E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: retina Absent

Specimen E14: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: retina Absent Submitted Image - 68be14

Specimen E16: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: retina Absent S2_PrCdh E16 , Submitted Image - 68be16

Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: retina outer nuclear layer Weak Regionally restricted Submitted Image - 68Be18.5 , Submitted Image - 68be18 , S2_PrCdh E18 Expression was detected in a subset of cells in the scleral outer neuroblastic layer.

Specimen P0/1: postnatal day 0-1 (more )
Structure Level Pattern Image Note
TS27: retina outer nuclear layer Weak Regionally restricted Submitted Image - 68Bp0.5 , Submitted Image - 68bp0 , S2_PrCdh P0 , Submitted Image - 68Bp1.5 , Submitted Image - 68bp0b Expression was detected in subsets of cells in the scleral outer neuroblastic layer.

Specimen P2/3: postnatal day 2-3 (more )
Structure Level Pattern Image Note
TS27: retina outer nuclear layer Weak Regionally restricted Submitted Image - 68Bp2.5 , S2_PrCdh P2 , Submitted Image - 68bp2b , Submitted Image - 68bp2 , Submitted Image - 68Bp3.5 Expression was detected in the scleral outer neuroblastic layer.

Specimen P4/5: postnatal day 4-5 (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present Regionally restricted Submitted Image - 68bp4b , S2_PrCdh P4 , Submitted Image - 68bp4 Expression was detected in the scleral outer neuroblastic layer.

Specimen P6/7: postnatal day 6-7 (more )
Structure Level Pattern Image Note
TS28: retina layer Present Regionally restricted Submitted Image - 68bp6c , Submitted Image - 68bp6b , S2_PrCdh P6 , Submitted Image - 68bp6 Expression was detected in rods and in a small subset of amacrine or ganglion cells.

Specimen P8/10: postnatal day 8-10 (more )
Structure Level Pattern Image Note
TS28: retina layer Present Regionally restricted S2_PrCdh P8 , Submitted Image - 68Bp10.5 , Submitted Image - 68bp8 , Submitted Image - 68bp10 , Submitted Image - 68Bp8.5 , S2_PrCdh P10 , Submitted Image - 68Bp9.5 Expression was detected in rods and in a small subset of amacrine or ganglion cells.

Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present Regionally restricted Submitted Image - 68badc , Submitted Image - 68badd , Submitted Image - 68Badult , Submitted Image - 68bad , Submitted Image - 68badb , Submitted Image - 68bade , S2_PrCdh Adult Expression was detected in the inner segment.

Specimen CNS: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: cortical layer IV Present
TS28: neocortex region Present Regionally restricted Expression was detected in frontal cortex.
TS28: main olfactory bulb Present Regionally restricted Expression was detected in mitral cells.

Specimen Embryo: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: olfactory lobe Present Regionally restricted Expression was detected in olfactory bulb.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory