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Gene Expression Data
Assay Details
Assay
Reference: J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
Assay type: RNA in situ
MGI Accession ID: MGI:3585345
Gene symbol: Ubash3b
Gene name: ubiquitin associated and SH3 domain containing, B
Probe: IMAGE clone 4024394
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: This data is from Supplemental Table 5, Gene column, row: 133615 similar to ubiquitin-associated and SH3-containing protein. After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde prior to processing.
Results
Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: retina inner nuclear layer Present Regionally restricted Submitted Image - AB28e18.5 Expression was detected in the scleral inner neuroblastic layer.
TS26: retina outer nuclear layer Weak Submitted Image - AB28e18.5 Expression was detected in the outer neuroblastic layer.
Specimen P0/1: postnatal day 0-1 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Present Regionally restricted Submitted Image - AB28p0.5 Expression was detected in the scleral inner neuroblastic layer.
TS27: retina outer nuclear layer Weak Submitted Image - AB28p0.5 Expression was detected in the outer neuroblastic layer.
Specimen P2/3: postnatal day 2-3 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Present Regionally restricted Submitted Image - AB28p3.5 Expression was detected in the scleral inner neuroblastic layer.
TS27: retina outer nuclear layer Present Submitted Image - AB28p3.5 Expression was detected in the outer neuroblastic layer.
Specimen P6/7: postnatal day 6-7 (more )
Structure Level Pattern Image Note
TS28: retina layer Present Regionally restricted Submitted Image - AB28p6.5 Expression was detected in amacrine cells.
TS28: retina outer nuclear layer Present Submitted Image - AB28p6.5
TS28: retina inner nuclear layer Present Submitted Image - AB28p6.5
Specimen P8/10: postnatal day 8-10 (more )
Structure Level Pattern Image Note
TS28: retina layer Present Regionally restricted Submitted Image - AB28p10.5 Expression was detected in amacrine cells.
TS28: retina outer nuclear layer Present Submitted Image - AB28p10.5
TS28: retina inner nuclear layer Present Submitted Image - AB28p10.5
Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present
TS28: retina inner nuclear layer Present
TS28: retina ganglion cell layer Present Regionally restricted Expression was detected in a subset of ganglion cells.
Specimen CNS: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present Expression was detected in Purkinje cells.
TS28: globus pallidus Present
TS28: hippocampus Present Regionally restricted Expression in the hippocampus included interneurons.
TS28: central nervous system Present Expression was widespread.
Specimen Embryo: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: dorsal root ganglion Present
TS24: central nervous system Present Regionally restricted Expression was detected in the ventral CNS.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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