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Gene Expression Data
Assay Details
Assay
Reference: J:90283 Leimeister C, et al., Cloning and expression analysis of the mouse stroma marker Snep encoding a novel nidogen domain protein. Dev Dyn. 2004 Jun;230(2):371-7
Assay type: RNA in situ
MGI Accession ID: MGI:3579075
Gene symbol: Sned1
Gene name: sushi, nidogen and EGF-like domains 1
Probe: IMAGE clone 1054398
Probe preparation: Antisense RNA
Results
Specimen Not Shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: embryo Absent

Specimen 2A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: limb mesenchyme Present Regionally restricted 2A Expression is in the condensing mesenchyme.
TS17: trunk mesenchyme Present Regionally restricted 2A Expression is in two stripes along the body axis ventral to the spinal cord, and in stripes parallel to the developing somites.

Specimen 2B: embryonic day 10.5 (more )
Note: Embedded in albumin, 50 micron vibratome section.
Structure Level Pattern Image Note
TS17: trunk sclerotome Present 2B
TS17: neural tube Absent 2B
TS17: trunk dermomyotome Absent 2B

Specimen 2C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: head mesenchyme Present 2C
TS20: forelimb interdigital region Present 2C
TS20: hindlimb interdigital region Present 2C
TS20: tail mesenchyme Present Regionally restricted 2C Expression is in stripes, the intersegmental mesenchyme.

Specimen 2D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: head mesenchyme Present Regionally restricted 2D Expression is in mesenchyme surrounding the brain.
TS22: trunk mesenchyme Present Regionally restricted 2D Expression is in mesenchyme surrounding the spinal cord and adrenal gland.
TS22: Meckel's cartilage Present 2D
TS22: lower jaw mesenchyme Present 2D
TS22: pancreas Present 2D
TS22: rib cartilage condensation Present 2D
TS22: skeleton Present 2D
TS22: upper jaw mesenchyme Present 2D
TS22: vertebral cartilage condensation Present 2D

Specimen 2E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: choroid plexus Present 2E

Specimen 2F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cochlear duct mesenchyme Present 2F
TS22: nasal septum mesenchyme Present 2F

Specimen 2G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nose Present Regionally restricted 2G Expression is in the mesenchyme.

Specimen 2H: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: sublingual gland primordium mesenchyme Present Regionally restricted 2H
TS22: submandibular gland primordium mesenchyme Present Regionally restricted 2H

Specimen 2I: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: diaphragm mesothelium Present 2I
TS22: greater sac mesothelium Present 2I
TS22: omental bursa mesothelium Present 2I
TS22: pericardio-peritoneal canal mesothelium Present 2I
TS22: pericardium Present 2I
TS22: pleura Present 2I
TS22: head mesenchyme Present Regionally restricted 2I Expression is surrounding developing organs, such as salivary glands.
TS22: trunk mesenchyme Present Regionally restricted 2I Expression is surrounding developing organs such as thymus, adrenal glands and kidney.

Specimen 2J: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: renal cortex Present Regionally restricted 2J Expression is in the cortical stroma.
TS22: renal medullary interstitium Present 2J

Specimen 2K: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lung mesenchyme Present Single cells 2K

Specimen 2L: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hindlimb interdigital region Strong 2L
TS22: hindlimb digit Weak 2L

Specimen 2M: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: peripheral nervous system Strong Regionally restricted 2M Expression is in dispersed cells of the ganglia and nerves.
TS25: spleen Strong 2M
TS25: metanephros Strong Regionally restricted 2M Expression is in the stroma.
TS25: spinal cord Strong Single cells 2M
TS25: trunk mesenchyme Strong Regionally restricted 2M Expression is in cells surrounding the spinal cord.
TS25: rib Weak 2M
TS25: smooth muscle tissue Weak Regionally restricted 2M Expression is in smooth muscle of the stomach.
TS25: greater sac mesothelium Present 2M
TS25: omental bursa mesothelium Present 2M
TS25: pericardium Present 2M
TS25: pleura Present 2M

Specimen 2N: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: peripheral nervous system Present Regionally restricted 2N Expression is in dispersed cells of the ganglia and nerves.
TS25: trigeminal ganglion Present Regionally restricted 2N Expression is in dispersed cells of the ganglia and nerves.
TS25: head mesenchyme Present Regionally restricted 2N Expression is surrounding the brain.
TS25: cranium Present 2N
TS25: ear Present 2N
TS25: tooth Present 2N
TS25: vibrissa Present 2N
TS25: vomeronasal organ Present 2N
TS25: pituitary gland Present Single cells 2N

Specimen 3E: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: renal cortex Present Regionally restricted 3E Expression is in the stromal cells.
TS25: medullary component of mesenchymal stroma Present 3E

Specimen 3J: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: renal cortex Present Regionally restricted 3J Expression is in the stromal cells.
TS25: medullary component of mesenchymal stroma Present 3J

Specimen 3K: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: renal cortex Present Regionally restricted 3K Snep staining is in stromal cells of the cortex and is absent from the ureteric bud ends and the condensing mesenchyme.
TS22: renal medullary interstitium Present Regionally restricted 3K Expression is in the interstitial cells of the medulla.
TS22: early nephron Absent 3K


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory