About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:95328 Hirano M, et al., cfm is a novel gene uniquely expressed in developing forebrain and midbrain, but its null mutant exhibits no obvious phenotype. Gene Expr Patterns. 2005 Feb;5(3):439-44
Assay type: RNA in situ
MGI Accession ID: MGI:3575279
Gene symbol: Rflnb
Gene name: refilin B
Probe: cfm cDNA
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen Not Shown: embryonic day 8.0 (more )
Note: 3 somites.
Structure Level Pattern Image Note
TS12: embryo Absent Absent in the 3 somite stage.

Specimen 1a: embryonic day 8.0 (more )
Note: 5 somites.
Structure Level Pattern Image Note
TS12: future prosencephalon Present Regionally restricted 1a Expression is in the caudal forebrain.
TS12: future midbrain Present 1a

Specimen 1b: embryonic day 8.0 (more )
Note: 5 somites.
Structure Level Pattern Image Note
TS12: future prosencephalon Present Regionally restricted 1b Expression is in the caudal forebrain.
TS12: future midbrain Present 1b
TS12: future spinal cord neural plate Absent 1b Absent in the rostral neural plate.

Specimen 1c: embryonic day 8.0 (more )
Note: 7 somites.
Structure Level Pattern Image Note
TS12: future midbrain Present 1c

Specimen 1d: embryonic day 8.0 (more )
Note: 7 somites.
Structure Level Pattern Image Note
TS12: future midbrain Present 1d

Specimen 1e: embryonic day 8.5 (more )
Note: 9 somites.
Structure Level Pattern Image Note
TS13: future midbrain Weak 1e

Specimen 1f: embryonic day 8.5 (more )
Note: 9 somites.
Structure Level Pattern Image Note
TS13: future midbrain Weak 1f
TS13: future prosencephalon Present Regionally restricted 1f Expression is in the caudal forebrain.

Specimen 1g: embryonic day 8.5 (more )
Note: 9 somites.
Structure Level Pattern Image Note
TS13: future prosencephalon Present 1g Expression is in the caudal forebrain.

Specimen 1h: embryonic day 8.5 (more )
Note: 9 somites.
Structure Level Pattern Image Note
TS13: future spinal cord neural plate Absent 1h Absent in the rostral neural plate.

Specimen 1i: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: future midbrain Weak Regionally restricted 1i Expression is in a broad stripe pattern in the midregion.
TS14: prosencephalon Present Regionally restricted 1i Expression is in the caudal forebrain.

Specimen 1j: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: future midbrain Weak Regionally restricted 1j Expression is in a broad stripe pattern in the midregion.
TS14: prosencephalon Present Regionally restricted 1j Expression is in the caudal forebrain.

Specimen 1k: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: diencephalon Present Regionally restricted 1k Expression is in the dorsal thalamus.
TS15: future midbrain Trace 1k
TS15: 1st branchial arch Present Regionally restricted 1k Expression is in the rostral aspect.
TS15: Rathke's pouch Present 1k

Specimen 1l: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: diencephalon Present Regionally restricted 1l Expression is in the dorsal thalamus.
TS15: future midbrain Trace 1l
TS15: 1st branchial arch Present Regionally restricted 1l Expression is in the rostral aspect.
TS15: Rathke's pouch Present 1l

Specimen 1m: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: epithalamus Present Regionally restricted 1m Expression is in the epiphysis.
TS20: 3rd ventricle Absent 1m
TS20: brain mantle layer Absent 1m
TS20: brain ventricular layer Absent 1m
TS20: choroid plexus Absent 1m
TS20: diencephalon floor plate Absent 1m
TS20: diencephalon gland Absent 1m
TS20: diencephalon lamina terminalis Absent 1m
TS20: diencephalon lateral wall Absent 1m
TS20: diencephalon mantle layer Absent 1m
TS20: diencephalon roof plate Absent 1m
TS20: diencephalon ventricular layer Absent 1m
TS20: hindbrain Absent 1m
TS20: hypothalamus Absent 1m
TS20: midbrain Absent 1m
TS20: telencephalon Absent 1m
TS20: thalamus Absent 1m

Specimen 1n: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: epithalamus Present Regionally restricted 1n Expression is in the epiphysis.
TS20: 3rd ventricle Absent 1n
TS20: brain mantle layer Absent 1n
TS20: brain ventricular layer Absent 1n
TS20: choroid plexus Absent 1n
TS20: diencephalon floor plate Absent 1n
TS20: diencephalon gland Absent 1n
TS20: diencephalon lamina terminalis Absent 1n
TS20: diencephalon lateral wall Absent 1n
TS20: diencephalon mantle layer Absent 1n
TS20: diencephalon roof plate Absent 1n
TS20: diencephalon ventricular layer Absent 1n
TS20: hindbrain Absent 1n
TS20: hypothalamus Absent 1n
TS20: midbrain Absent 1n
TS20: telencephalon Absent 1n
TS20: thalamus Absent 1n

Specimen 1o: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: genital tubercle Present 1o
TS20: lung Present 1o
TS20: occipital myotome Present 1o
TS20: peripheral nervous system Present Regionally restricted 1o Expression is in peripheral nerves.
TS20: alimentary system Present Regionally restricted 1o Expression is in the inner wall of the alimentary canal.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
04/16/2024
MGI 6.23
The Jackson Laboratory