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Gene Expression Data
Assay Details
Assay
Reference: J:55994 Hillenbrand R, et al., The close homologue of the neural adhesion molecule L1 (CHL1): patterns of expression and promotion of neurite outgrowth by heterophilic interactions. Eur J Neurosci. 1999 Mar;11(3):813-26
Assay type: RNA in situ
MGI Accession ID: MGI:3574075
Gene symbol: Chl1
Gene name: cell adhesion molecule L1-like
Probe: CHL1 cDNA2
Probe preparation: Antisense RNA
Results
Specimen 2A: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: hippocampus pyramidal cell layer Present 2A
TS28: dentate gyrus granule cell layer Absent 2A
TS28: dentate gyrus hilus Present Regionally restricted 2A Expression is present in the interneurons.
TS28: hippocampus Present Regionally restricted 2A Expression is present in the interneurons.
TS28: hippocampus CA1 Present 2A There is more expression in CA1 and CA3 pyramidal cells than in CA2 and CA4
TS28: hippocampus CA2 Present 2A There is more expression in CA1 and CA3 pyramidal cells than in CA2 and CA4
TS28: hippocampus CA3 Present 2A There is more expression in CA1 and CA3 pyramidal cells than in CA2 and CA4
TS28: hippocampus CA4 Present 2A There is more expression in CA1 and CA3 pyramidal cells than in CA2 and CA4
TS28: cortical layer V Present 2A
TS28: thalamus Present 2A Expression is less strong in the medial/lateral thalamus than in other parts of the thalamus.
TS28: fimbria hippocampus Absent 2A
TS28: cerebral internal capsule Absent 2A There is no expression in the internal capsule.

Specimen 2C: postnatal week 3 (more )
Structure Level Pattern Image Note
TS28: hippocampus CA1 Strong Regionally restricted 2C There is strong expression in the pyramidal cells.
TS28: hippocampus CA2 Present Regionally restricted 2C Expression is present in the pyramidal cells.
TS28: hippocampus CA3 Present Regionally restricted 2C Expression is present in the pyramidal cells.
TS28: hippocampus CA4 Present Regionally restricted 2C Expression is present in the pyramidal cells.
TS28: dentate gyrus granule cell layer Present Uniform 2C
TS28: thalamus Weak 2C
TS28: subthalamic nucleus Strong 2C
TS28: fimbria hippocampus Absent 2C
TS28: cerebral internal capsule Absent 2C There is no expression in the internal capsule.
TS28: lateral habenular nucleus Strong Uniform 2C

Specimen 2E: postnatal day 13 (more )
Structure Level Pattern Image Note
TS28: femoral nerve Present Single cells 2E Expression is present in a few cells in all branches of the femoral nerve.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory