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Gene Expression Data
Assay Details
Assay
Reference: J:36919 Tanaka Y, et al., Expression of 47 kDa heat shock protein (HSP47) during development of mouse cornea. Exp Eye Res. 1996 Oct;63(4):383-93
Assay type: RNA in situ
MGI Accession ID: MGI:3040428
Gene symbol: Col1a1
Gene name: collagen, type I, alpha 1
Probe: Col1a1 probe3
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 7A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cornea stroma Present Regionally restricted 7A Expression was detected in the mesenchymal cells of the presumptive corneal stroma.
TS20: eye Present Regionally restricted 7A Among other structures of the eye, expression was detected in the choroid.
TS20: perioptic mesenchyme Present Regionally restricted 7A Expression was detected in the sclera.
TS20: lens vesicle Absent 7A
TS20: retina Absent 7A

Specimen 7B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cornea stroma Strong Regionally restricted 7B Expression was detected in the mesenchymal cells of the presumptive corneal stroma.
TS21: optic choroid Strong 7B
TS21: perioptic mesenchyme Strong Regionally restricted 7B Expression was detected in the sclera.
TS21: lens Absent 7B
TS21: retina Absent 7B

Specimen 7C: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cornea stroma Strong Regionally restricted 7C Expression was detected in the mesenchymal cells of the presumptive corneal stroma.
TS24: eyelid Strong 7C
TS24: optic choroid Strong 7C
TS24: sclera Strong 7C
TS24: lens Absent 7C
TS24: retina Absent 7C

Specimen 7D: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cornea stroma Strong Regionally restricted 7D Expression was detected in the mesenchymal cells of the presumptive corneal stroma.
TS26: eyelid Strong 7D
TS26: optic choroid Strong 7D
TS26: sclera Strong 7D
TS26: lens Absent 7D
TS26: retina Absent 7D

Specimen 8A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cornea stroma Present Regionally restricted 8A Expression was detected in the mesenchymal cells.
TS20: cornea epithelium Absent 8A Expression was absent from the surface ectoderm.

Specimen 8B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cornea stroma Present Regionally restricted 8B Expression was detected in the mesenchymal cells.
TS21: cornea epithelium Absent 8B Expression was absent from the surface ectoderm.

Specimen 8C: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cornea stroma Present Regionally restricted 8C Expression was detected in the mesenchymal cells.
TS24: cornea epithelium Absent 8C Expression was absent from the surface ectoderm.

Specimen 8D: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cornea stroma Present Regionally restricted 8D Expression was detected in the mesenchymal cells.
TS26: cornea epithelium Absent 8D Expression was absent from the surface ectoderm.

Specimen 8E: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cornea stroma Present Regionally restricted 8E Expression was detected in the mesenchymal cells.
TS28: cornea epithelium Absent 8E Expression was absent from the surface ectoderm.

Specimen 8F: postnatal day 14 (more )
Structure Level Pattern Image Note
TS28: cornea stroma Present Regionally restricted 8F Expression was detected in the mesenchymal cells.
TS28: cornea epithelium Absent 8F Expression was absent from the surface ectoderm.

Specimen not shown: postnatal day 3 (more )
Structure Level Pattern Image Note
TS27: cornea stroma Present Regionally restricted Expression was detected in the mesenchymal cells.
TS27: cornea epithelium Absent Expression was absent from the surface ectoderm.

Specimen not shown: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cornea stroma Present Regionally restricted Expression was detected in the mesenchymal cells.
TS28: cornea epithelium Absent Expression was absent from the surface ectoderm.

Specimen not shown: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: eye Weak


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
01/06/2026
MGI 6.24
The Jackson Laboratory