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Gene Expression Data
Assay Details
Assay
Reference: J:85959 Aruga J, et al., Identification and characterization of Slitrk, a novel neuronal transmembrane protein family controlling neurite outgrowth. Mol Cell Neurosci. 2003 Sep;24(1):117-29
Assay type: RNA in situ
MGI Accession ID: MGI:2680223
Gene symbol: Slitrk1
Gene name: SLIT and NTRK-like family, member 1
Probe: Slitrk1 probe2
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3a: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: diencephalon Present 3a
TS25: thalamus Present 3a
TS25: hypothalamus Present Regionally restricted 3a Expression was detected in the ventromedial hypothalamus.
TS25: midbrain Present Regionally restricted 3a Expression was detected in the medial part of the periaqueductal gray matter.
TS25: hippocampus Present Regionally restricted 3a Expression was detected in the pyramidal layer.

Specimen 3g: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: cerebral cortex Present Regionally restricted 3g Expression was detected in the subventricular zone, the subplate and the deeper layer of the cortical plate.
TS25: cerebral cortex subventricular zone Present 3g
TS25: cortical plate Present Regionally restricted 3g Expression was detected in the subventricular zone, the subplate and the deeper layer of the cortical plate.

Specimen 4a: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube mantle layer Present 4a

Specimen 4c: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: spinal cord mantle layer Present 4c

Specimen 4e: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: spinal cord mantle layer Present 4e
TS25: basal columns Present Regionally restricted 4e Expression was detected in the lateral and medial motor columns.
TS25: spinal cord ventricular layer Absent 4e Expression was absent from the ventricular neural cells.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory