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Gene Expression Data
Assay Details
Assay
Reference: J:61328 Cohen DR, et al., Expression of two novel mouse iroquois homeobox genes during neurogenesis. Mech Dev. 2000 Mar 1;91(1-2):317-21
Assay type: RNA in situ
MGI Accession ID: MGI:2677866
Gene symbol: Irx5
Gene name: Iroquois homeobox 5
Probe: pIrx5a
Probe preparation: Antisense labelled with digoxigenin RNA
Assay notes: Authors described two probes and said that similar expression patterns were detected with each; it is possible MGI:2677432 was used to generate some or all of these data.
Results
Specimen Not Shown: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: embryo Present

Specimen 2C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: future midbrain Present Regionally restricted 2C Expression is throughout the dorsolateral region, absent at the mid/hindbrain boundary.
TS15: future hindbrain Present Regionally restricted 2C Expression is in the ventrolateral region of the metencephalon, absent at the mid/hindbrain boundary.
TS15: neural tube lateral wall Present Regionally restricted 2C Expression is in the ventricular layer.
TS15: forelimb bud Present 2C
TS15: hindlimb ridge Present 2C
TS15: heart atrium Present 2C

Specimen 2H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube lateral wall Present Regionally restricted 2H Expression is in the ventricular layer.
TS17: forelimb bud Present 2H
TS17: primitive ventricle Present 2H
TS17: heart atrium Present 2H
TS17: branchial arch Present 2H
TS17: foregut Present 2H

Specimen 3A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube basal columns Present Regionally restricted 3A Expression is in motor neurons.

Specimen 3B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: basal columns Present Regionally restricted 3B Expression is in motor neurons.
TS21: spinal cord marginal layer Present 3B
TS21: spinal cord ventricular layer Present 3B

Specimen 4I: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: neural retinal epithelium Present 4I

Specimen 4J: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: neural retina Present 4J


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/28/2024
MGI 6.13
The Jackson Laboratory