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Gene Expression Data
Assay Details
Assay
Reference: J:16386 Echelard Y, et al., Sonic hedgehog, a member of a family of putative signaling molecules, is implicated in the regulation of CNS polarity. Cell. 1993 Dec 31;75(7):1417-30
Assay type: RNA in situ
MGI Accession ID: MGI:2449702
Gene symbol: Foxa2
Gene name: forkhead box A2
Probe: c21
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2B: embryonic day 7.5 (more )
Note: Late streak egg cylinder. Lateral view.
Structure Level Pattern Image Note
TS11: node Present 2B

Specimen 2D: embryonic day 7.5 (more )
Note: Early head fold stage.
Structure Level Pattern Image Note
TS11: node Present 2D
TS11: notochordal process Present 2D

Specimen 2H: embryonic day 8.0 (more )
Note: 2-3 somite stage.
Structure Level Pattern Image Note
TS12: future hindbrain Present Regionally restricted 2H Expression was detected ventrally.
TS12: future midbrain Present Regionally restricted 2H Expression was detected ventrally.
TS12: primitive streak Present Regionally restricted 2H Expression was detected in the node.

Specimen 2K,2L: embryonic day 8.25 (more )
Note: 5 somite stage.
Structure Level Pattern Image Note
TS12: future midbrain Present Regionally restricted 2L , 2K Expression was detected ventrolaterally.
TS12: future prosencephalon floor plate Present Regionally restricted 2L , 2K Expression was detected ventrolaterally.
TS12: neural tube floor plate Present 2L , 2K Expression was detected in the floor plate down much of the neural axis.
TS12: notochord Present 2K , 2L
TS12: foregut diverticulum Present 2K , 2L
TS12: primitive streak Present Regionally restricted 2K , 2L Expression was detected in the node.
TS12: future hindbrain Present Regionally restricted 2K , 2L Expression was present in the floor plate.

Specimen 2P: embryonic day 8.5 (more )
Note: 10 somite stage.
Structure Level Pattern Image Note
TS13: notochord Present Regionally restricted 2P Expression in the head process was lost.
TS13: primitive streak Present Regionally restricted 2P Expression was detected in the node.
TS13: gut endoderm Present Regionally restricted 2P Expression was detected in the caudal endoderm.

Specimen Not Shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: metencephalon floor plate Present
TS19: myelencephalon floor plate Present
TS19: neural tube floor plate Present

Specimen 2R: embryonic day 9.0 (more )
Note: 15 somite stage.
Structure Level Pattern Image Note
TS14: gut Present Regionally restricted 2R Expression was uniformly detected along the dorso-ventral axis of caudal endoderm.

Specimen 2T: embryonic day 9.5 (more )
Note: 25-29 somite stage.
Structure Level Pattern Image Note
TS15: branchial arch endoderm Present Regionally restricted 2T Expression was detected in the pharyngeal endoderm.

Specimen 3B: embryonic day 8.0 (more )
Note: 2-3 somite stage.
Structure Level Pattern Image Note
TS12: future hindbrain neural ectoderm Present Regionally restricted 3B Expression was detected ventrally.
TS12: notochord Present 3B

Specimen 3D: embryonic day 8.0 (more )
Note: 5 somite stage.
Structure Level Pattern Image Note
TS12: future prosencephalon Present Regionally restricted 3D Expression was detected ventrolaterally.
TS12: foregut diverticulum Present 3D

Specimen 3F: embryonic day 8.5 (more )
Note: 15 somite stage.
Structure Level Pattern Image Note
TS13: notochord Present Regionally restricted 3F Expression was absent from the head process.
TS13: gut endoderm Present Regionally restricted 3F Expression was detected in the caudal endoderm.
TS13: neural tube floor plate Present 3F

Specimen 7A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: central nervous system Present Regionally restricted 7A Expression was detected at the ventral midline.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory