About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:32072 Ruberte E, et al., Retinoic acid receptors and cellular retinoid binding proteins. II. Their differential pattern of transcription during early morphogenesis in mouse embryos. Development. 1991 Jan;111(1):45-60
Assay type: RNA in situ
MGI Accession ID: MGI:1934382
Gene symbol: Crabp1
Gene name: cellular retinoic acid binding protein I
Probe: CrabpI cDNA3
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1A: embryonic day 7.5-8.0 (more )
Note: Presomite stage.
Structure Level Pattern Image Note
TS11: embryo Present Regionally restricted 1A CRABP Well-defined labelling in specific regions.
TS11: embryo mesenchyme Present Regionally restricted 1A CRABP Expression throughout primary mesenchyme just lateral to the primitive streak.
TS11: allantois Present 1A CRABP

Specimen 1B: embryonic day 7.5-8.0 (more )
Note: Presomite stage.
Structure Level Pattern Image Note
TS11: embryo Present Regionally restricted 1B CRABP Well-defined labelling in specific regions.
TS11: embryo mesenchyme Present Regionally restricted 1B CRABP Expression throughout primary mesenchyme just lateral to the primitive streak.
TS11: primitive streak Absent 1B CRABP

Specimen 2A: embryonic day 8.0 (more )
Note: 4 to 6 somites.
Structure Level Pattern Image Note
TS12: head mesenchyme Present Regionally restricted 2A CRABP Transcripts in primary mesenchyme immediately subjacent to epithelium of both midbrain and hindbrain. Cannot distinguish between neural crest and primary mesenchyme in the cranial region.

Specimen 2B: embryonic day 8.0 (more )
Note: 4 to 6 somites.
Structure Level Pattern Image Note
TS12: neural ectoderm Present Regionally restricted 2B CRABP Transcripts in neural epithelium restricted to a small area of the hindbrain, caudal to the preotic sulcus.
TS12: head mesenchyme Present Regionally restricted 2B CRABP Transcripts in primary mesenchyme immediately subjacent to epithelium of both midbrain and hindbrain. Cannot distinguish between neural crest and primary mesenchyme in the cranial region.

Specimen 3: embryonic day 8.0 (more )
Note: 4 to 6 somites.
Structure Level Pattern Image Note
TS12: neural ectoderm Present Regionally restricted 3_CRABP Transcripts in neural epithelium restricted to a small area of the hindbrain, caudal to the preotic sulcus.

Specimen 4A: embryonic day 8.0 (more )
Note: 7 somites.
Structure Level Pattern Image Note
TS12: future hindbrain neural ectoderm Present Regionally restricted 4A The region caudal to the preotic sulcus showed the highest level of labelling in the neural epithelium. Labelling extended to the hindbrain region just rostral to preotic sulcus, with the basal region of epithelium most intensely labelled.
TS12: lateral plate mesoderm Present Regionally restricted 4A Transcripts in lateral plate mesoderm dorsal to the heart.
TS12: future hindbrain floor plate Absent 4A

Specimen 4B: embryonic day 8.0 (more )
Note: 7 somites.
Structure Level Pattern Image Note
TS12: future hindbrain neural ectoderm Present Regionally restricted 4B
TS12: future hindbrain floor plate Absent 4B

Specimen not shown: embryonic day 8.0 (more )
Note: 7 somites.
Structure Level Pattern Image Note
TS12: embryo mesenchyme Present Regionally restricted Transcripts in caudal primary mesenchyme had diminished.

Specimen 4C: embryonic day 8.5 (more )
Note: 8 to 10 somites.
Structure Level Pattern Image Note
TS13: neural ectoderm Present Regionally restricted 4C Strong expression in specific regions of neural epithelium. Rostral limit at the midbrain-forebrain junction; caudal limit at the level of the first occipital somite.
TS13: future hindbrain Strong Regionally restricted 4C In rostral hindbrain, signal was strongest on basal side of epithelium. More caudally, strong labelling both apically and basally.
TS13: neural tube floor plate Absent 4C Midline suprachordal cells (future floor plate of the closed neural tube) were unlabelled.
TS13: head mesenchyme derived from neural crest Strong Regionally restricted 4C High levels of expression in cranial mesenchyme cells in positions corresponding to exprected positions of neural crest cells (e.g. 1st arch).

Specimen 4D: embryonic day 8.5 (more )
Note: 8 to 10 somites.
Structure Level Pattern Image Note
TS13: neural ectoderm Present Regionally restricted 4D Strong expression in specific regions of neural epithelium. Rostral limit at the midbrain-forebrain junction; caudal limit at the level of the first occipital somite.
TS13: future hindbrain Strong Regionally restricted 4D In rostral hindbrain, signal was strongest on basal side of epithelium. More caudally, strong labelling both apically and basally.
TS13: neural tube floor plate Absent 4D Midline suprachordal cells (future floor plate of the closed neural tube) were unlabelled.
TS13: future spinal cord neural fold Ambiguous 4D Signal was reduced or absent from the lateral edges of neural epithelium from which crest cells had emigrated.
TS13: head mesenchyme derived from neural crest Strong Regionally restricted 4D High levels of expression in cranial mesenchyme cells in positions corresponding to exprected positions of neural crest cells (e.g. 1st arch).

Specimen 5A: embryonic day 8.5 (more )
Note: 8 to 10 somites.
Structure Level Pattern Image Note
TS13: neural ectoderm Present Regionally restricted 5A CRABP Strong expression in specific regions of neural epithelium. Rostral limit at the midbrain-forebrain junction; caudal limit at the level of the first occipital somite.
TS13: head mesenchyme derived from neural crest Strong Regionally restricted 5A CRABP High levels of expression in cranial mesenchyme cells in positions corresponding to exprected positions of neural crest cells (e.g. 1st arch).

Specimen 5B: embryonic day 8.5 (more )
Note: 8 to 10 somites.
Structure Level Pattern Image Note
TS13: neural ectoderm Present Regionally restricted 5B CRABP Strong expression in specific regions of neural epithelium. Rostral limit at the midbrain-forebrain junction; caudal limit at the level of the first occipital somite.
TS13: head mesenchyme derived from neural crest Strong Regionally restricted 5B CRABP High levels of expression in cranial mesenchyme cells in positions corresponding to exprected positions of neural crest cells (e.g. 1st arch).

Specimen 5C: embryonic day 8.5 (more )
Note: 8 to 10 somites.
Structure Level Pattern Image Note
TS13: neural ectoderm Present Regionally restricted 5C CRABP Strong expression in specific regions of neural epithelium. Rostral limit at the midbrain-forebrain junction; caudal limit at the level of the first occipital somite.
TS13: head mesenchyme derived from neural crest Strong Regionally restricted 5C CRABP High levels of expression in cranial mesenchyme cells in positions corresponding to exprected positions of neural crest cells (e.g. 1st arch).
TS13: trunk mesenchyme Present Regionally restricted 5C CRABP Caudally, strongest signal in mesoderm lateral to the primitive streak, and in presomitic and lateral mesoderm cranial to the primitive streak.

Specimen 5D: embryonic day 8.5 (more )
Note: 8 to 10 somites.
Structure Level Pattern Image Note
TS13: neural ectoderm Present Regionally restricted 5D CRABP Strong expression in specific regions of neural epithelium. Rostral limit at the midbrain-forebrain junction; caudal limit at the level of the first occipital somite.
TS13: head mesenchyme derived from neural crest Strong Regionally restricted 5D CRABP High levels of expression in cranial mesenchyme cells in positions corresponding to exprected positions of neural crest cells (e.g. 1st arch).
TS13: trunk mesenchyme Present Regionally restricted 5D CRABP Caudally, strongest signal in mesoderm lateral to the primitive streak, and in presomitic and lateral mesoderm cranial to the primitive streak.
TS13: lateral plate mesoderm Present Regionally restricted 5D CRABP Diminishing intensity into most recently formed 2 or 3 pairs of somites.
TS13: trunk somite Present Regionally restricted 5D CRABP Diminishing intensity into most recently formed 2 or 3 pairs of somites.
TS13: trunk unsegmented mesenchyme Present Regionally restricted 5D CRABP
TS13: mesenchyme derived from head mesoderm Absent 5D CRABP Mesoderm-derived cranial mesenchyme appears unlabelled; it is not clear whether labelled subectodermal cells in Fig. 5D originate from neural crest or from mesoderm.

Specimen not shown: embryonic day 8.5 (more )
Note: 8 to 10 somites.
Structure Level Pattern Image Note
TS13: future midbrain Present
TS13: future brain Present Regionally restricted Signal intensity was greater in the hindbrain than in the midbrain.

Specimen 6A: embryonic day 9.0 (more )
Note: 12 to 14 somites.
Structure Level Pattern Image Note
TS14: prosencephalon Absent 6A CRABP
TS14: future hindbrain Present Regionally restricted 6A CRABP Highest signal just rostral to otic placodes; rostral and caudal to this, signal was strongest basally, and a medial unlabelled area was more extensive. A small group of midline supranotochordal cells was unlabelled.
TS14: branchial arch Present 6A CRABP Higher levels of transcripts in neural crest-derived mesenchyme of the head and pharyngeal arches than in primary mesenchyme.
TS14: mesenchyme derived from head mesoderm Present 6A CRABP Higher levels of transcripts in neural crest-derived mesenchyme of the head and pharyngeal arches than in primary mesenchyme.

Specimen 6B: embryonic day 9.0 (more )
Note: 12 to 14 somites.
Structure Level Pattern Image Note
TS14: future hindbrain Present Regionally restricted 6B CRABP Highest signal just rostral to otic placodes; rostral and caudal to this, signal was strongest basally, and a medial unlabelled area was more extensive. A small group of midline supranotochordal cells was unlabelled.
TS14: branchial arch Present 6B CRABP Higher levels of transcripts in neural crest-derived mesenchyme of the head and pharyngeal arches than in primary mesenchyme.
TS14: mesenchyme derived from head mesoderm Present 6B CRABP Higher levels of transcripts in neural crest-derived mesenchyme of the head and pharyngeal arches than in primary mesenchyme.

Specimen 6C: embryonic day 9.0 (more )
Note: 12 to 14 somites.
Structure Level Pattern Image Note
TS14: future hindbrain Present Regionally restricted 6C CRABP Highest signal just rostral to otic placodes; rostral and caudal to this, signal was strongest basally, and a medial unlabelled area was more extensive. A small group of midline supranotochordal cells was unlabelled.
TS14: head mesenchyme derived from neural crest Present Regionally restricted 6C CRABP Labelling in a group of cells, presumeably neural crest, at the occipital hindbrain level close to the heart, with smaller groups close to the neural tube.
TS14: neural crest Present Regionally restricted 6C CRABP Labelling in a group of cells, presumeably neural crest, at the occipital hindbrain level close to the heart, with smaller groups close to the neural tube.

Specimen 7A: embryonic day 9.0 (more )
Note: 12 to 14 somites.
Structure Level Pattern Image Note
TS14: head mesenchyme derived from neural crest Present Regionally restricted 7A Labelling in a group of cells, presumeably neural crest, at the occipital hindbrain level close to the heart, with smaller groups close to the neural tube.
TS14: neural crest Present Regionally restricted 7A Labelling in a group of cells, presumeably neural crest, at the occipital hindbrain level close to the heart, with smaller groups close to the neural tube.

Specimen 7B: embryonic day 9.0 (more )
Note: 12 to 14 somites.
Structure Level Pattern Image Note
TS14: head mesenchyme derived from neural crest Present Regionally restricted 7B Labelling in a group of cells, presumeably neural crest, at the occipital hindbrain level close to the heart, with smaller groups close to the neural tube.
TS14: neural crest Present Regionally restricted 7B Labelling in a group of cells, presumeably neural crest, at the occipital hindbrain level close to the heart, with smaller groups close to the neural tube.

Specimen 7C: embryonic day 9.0 (more )
Note: 12 to 14 somites.
Structure Level Pattern Image Note
TS14: surface ectoderm Absent 7C
TS14: trunk somite Absent 7C

Specimen not shown: embryonic day 9.0 (more )
Note: 12 to 14 somites.
Structure Level Pattern Image Note
TS14: future midbrain Present
TS14: mesenchyme derived from lateral plate Present Lower signal than at the previous stage.
TS14: embryo Present Regionally restricted Authors state that no labelling was present in endodermal layers.

Specimen 8A: embryonic day 9.0 (more )
Note: 18 to 20 somites.
Structure Level Pattern Image Note
TS14: embryo Present Regionally restricted 8A CRABP Authors state that the pattern of expression was not very differnt from that seen previously.
TS14: head mesenchyme derived from neural crest Present 8A CRABP Higher levels of transcripts in neural crest-derived cells.
TS14: mesenchyme derived from head mesoderm Present 8A CRABP Higher levels of transcripts in neural crest-derived cells.
TS14: head mesenchyme Present Regionally restricted 8A CRABP Expression in ring of frontonasal mesenchyme around the forebrain vesicle. Transcripts in pharyngeal arch mesenchyme of the face.
TS14: 1st branchial arch mandibular component mesenchyme Present 8A CRABP
TS14: prosencephalon Absent 8A CRABP
TS14: future hindbrain Present Regionally restricted 8A CRABP Particularly strong labelling in the marginal layer.
TS14: trunk mesenchyme Present Regionally restricted 8A CRABP Labelling in mesenchyme associated with the heart, ventral to the dorsal aorta.
TS14: gut Absent 8A CRABP No transcripts were found in gut endoderm.
TS14: trunk somite Absent 8A CRABP

Specimen 8B: embryonic day 9.0 (more )
Note: 18 to 20 somites.
Structure Level Pattern Image Note
TS14: embryo Present Regionally restricted 8B CRABP Authors state that the pattern of expression was not very differnt from that seen previously.
TS14: mesenchyme derived from head mesoderm Present 8B CRABP Higher levels of transcripts in neural crest-derived cells.
TS14: head mesenchyme derived from neural crest Present 8B CRABP Higher levels of transcripts in neural crest-derived cells.
TS14: prosencephalon Absent 8B CRABP
TS14: future midbrain Present 8B CRABP Rostral limit of neuroepithelial expression was at the forebrain-midbrain boundary.
TS14: otic pit Present 8B CRABP
TS14: gut Absent 8B CRABP No transcripts were found in gut endoderm.
TS14: trunk somite Absent 8B CRABP

Specimen not shown: embryonic day 9.0 (more )
Note: 18 to 20 somites.
Structure Level Pattern Image Note
TS14: neural tube Present Regionally restricted Labelling extended to the most rostral levels of the trunk neural tube.
TS14: central nervous system Present High levels of transcripts in cranial ganglia V, VII/VIII, IX and X.
TS14: mesenchyme derived from lateral plate Present
TS14: limb Present Regionally restricted Transcripts in the mesoderm of the limbs.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
05/07/2024
MGI 6.23
The Jackson Laboratory