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Gene Expression Data
Assay Details
Assay
Reference: J:38388 Dupe V, et al., In vivo functional analysis of the Hoxa-1 3' retinoic acid response element (3'RARE). Development. 1997 Jan;124(2):399-410
Assay type: RNA in situ
MGI Accession ID: MGI:1932130
Gene symbol: Hoxa2
Gene name: homeobox A2
Probe: Hoxa2 probe8
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 6A, middle: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: future hindbrain Present 6A middle
TS14: rhombomere 3 Present 6A middle Transcripts are up-regulated in r3 and r5.
TS14: rhombomere 4 Present 6A middle
TS14: rhombomere 5 Present 6A middle Transcripts are up-regulated in r3 and r5.
TS14: rhombomere 6 Present 6A middle
Specimen 6B, middle: embryonic day 9.0; Hoxa1tm2Ipc/Hoxa1+ (more )
Structure Level Pattern Image Note
TS14: future hindbrain Present 6B middle
TS14: rhombomere 3 Present 6B middle Transcripts are up-regulated in r3 and r5.
TS14: rhombomere 4 Present 6B middle
TS14: rhombomere 5 Present 6B middle Transcripts are up-regulated in r3 and r5.
TS14: rhombomere 6 Present 6B middle
Specimen 6C, middle: embryonic day 9.0; Hoxa1tm2Ipc/Hoxa1tm2Ipc (more )
Structure Level Pattern Image Note
TS14: future hindbrain Present 6C middle
TS14: rhombomere 3 Present 6C middle In 5 out of 5 homozygous mutants, transcript levels in r5 were lower than than in r3, comparable to those of r4 and r6.
TS14: rhombomere 4 Present 6C middle
TS14: rhombomere 5 Present 6C middle In 5 out of 5 homozygous mutants, transcript levels in r5 were lower than than in r3, comparable to those of r4 and r6.
TS14: rhombomere 6 Present 6C middle
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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