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Gene Expression Data
Assay Details
Assay
Reference: J:57676 McGrath KE, et al., Embryonic expression and function of the chemokine SDF-1 and its receptor, CXCR4. Dev Biol. 1999 Sep 15;213(2):442-56
Assay type: RNA in situ
MGI Accession ID: MGI:1346824
Gene symbol: Cxcl12
Gene name: C-X-C motif chemokine ligand 12
Probe: pS3H7
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen 2C: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: amnion ectoderm Present 2C
TS11: chorion ectoderm Absent 2C
TS11: embryo ectoderm Present Regionally restricted 2C Expression is in the inner embryonic ectoderm.
TS11: extraembryonic visceral endoderm Absent 2C

Specimen 3B: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: head mesenchyme Present 3B
TS13: surface ectoderm Present Regionally restricted 3B Expression is posterior.
TS13: hindgut diverticulum Present Regionally restricted 3B Expression is ventral.

Specimen 4B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: nervous system Absent 4B
TS17: embryo mesenchyme Strong Regionally restricted 4B Expression is in interstitial mesenchyme.
TS17: liver Present 4B
TS17: outflow tract Strong 4B
TS17: extraembryonic vascular system Present Regionally restricted 4B Expression surrounds the umbilical vessels.
TS17: primitive ventricle Present Regionally restricted 4B Expression is in the ventricular wall.

Specimen 5B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: embryo mesenchyme Present Regionally restricted 5B Expression is between the dorsal aorta and the spinal chord.

Specimen 5D: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: 4th ventricle Weak Regionally restricted 5D Expression is at the junction of the spinal chord central canal and the fourth ventrical.
TS19: future spinal cord Weak Regionally restricted 5D Expression is at the junction of the spinal chord central canal and the fourth ventrical.
TS19: brain Present Regionally restricted 5D Expression is in the loose mesenchyme and endothelium of the pia matter.

Specimen 5F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindbrain Present Regionally restricted 5F Expression at the midbrain/hindbrain junction is in the pia matter and in small patch of the pons
TS19: midbrain Present Regionally restricted 5F Expression at the midbrain/hindbrain junction is in the pia matter and in small patch of the pons

Specimen 4D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: outflow tract Present 4D
TS20: face mesenchyme Present Regionally restricted 4D Expression is in mesenchyme, particularly in facial mesenchyme.
TS20: aorta-gonad-mesonephros Present 4D
TS20: nervous system Absent 4D There is one small patch of expression in the pons.
TS20: liver Present 4D

Specimen 6B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: face mesenchyme Present Regionally restricted 6B Expression is in mesenchyme, particularly in facial mesenchyme.
TS20: aorta-gonad-mesonephros Present 6B

Specimen 6D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: outflow tract Present 6D
TS20: heart ventricle Present Regionally restricted 6D Expression is in the ventricular wall and some of the ventricular cushions.

Specimen 6F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: head mesenchyme Present 6F

Specimen 4F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lower jaw mesenchyme Present 4F
TS22: upper jaw mesenchyme Present 4F
TS22: embryo mesenchyme Present Regionally restricted 4F Expression is in mesenchyme surrounding pia matter, in the vertebrae and in the herniated gut.

Specimen 5H: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lower jaw mesenchyme Present 5H
TS22: upper jaw mesenchyme Present 5H
TS22: embryo mesenchyme Present Regionally restricted 5H Expression is in mesenchyme surrounding pia matter, in the vertebrae and in the herniated gut.

Specimen 6H: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: lower jaw mesenchyme Present Regionally restricted 6H There is high expression along the bottom of the lower jaw where whisker roots have formed.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory