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Gene Expression Data
Assay Details
Assay
Reference: J:20965 Timmons PM, et al., Expression and function of Pax 1 during development of the pectoral girdle. Development. 1994 Oct;120(10):2773-85
Assay type: RNA in situ
MGI Accession ID: MGI:1343385
Gene symbol: Pax1
Gene name: paired box 1
Probe: Pax1 probe3
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Assay notes: Hybridization with a paired-box containing fragment (MGI:1309770) and a 3'UTR probe (MGI:28160) gave the same result.
Results
Specimen not shown: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: forelimb bud Present Regionally restricted Expression domain included mesenchyme occupying the anterior proximal region of the forelimb bud and a small outward bulge that is present at the base of the bud at this stage.
TS16: forelimb bud mesenchyme Present
TS16: trunk sclerotome Strong Regionally restricted Expression levels were higher than in the forelimb.

Specimen 1A/A': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: forelimb bud mesenchyme Present Regionally restricted 1A/A' Greatest signal intensity was found anterodorsally. Level of expression was similar to that in the sclerotomes.
TS17: forelimb bud ectoderm Absent 1A/A'
TS17: trunk sclerotome Present Regionally restricted 1A/A'

Specimen 1C/C': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: hindlimb bud mesenchyme Weak Regionally restricted 1C/C' Expression was detected in the anterior proximal mesenchyme of the hindlimb bud.
TS17: trunk mesenchyme Weak Regionally restricted 1C/C' Expression was detected in a longitudinal band of mesenchyme in the lateral region of the trunk. This may correspond to the Wolffian ridge, from which the limb buds originally grow out.

Specimen 2A: embryonic day 11.5-12.5 (more )
Note: Stage 5 of forelimb development.
Structure Level Pattern Image Note
TS20: forelimb mesenchyme Present Regionally restricted 2A Expression was detected in a discrete portion of relatively uncondensed mesenchyme within the anterior proximal forelimb bud.

Specimen 2D: embryonic day 11.5-12.5 (more )
Note: Stage 7 of forelimb development. Fig. 2D is a more dorsal level than Fig. 2F.
Structure Level Pattern Image Note
TS20: shoulder mesenchyme Present Regionally restricted 2D The blastemal scapula blade and spina region corresponds to the dorsal limit of the expression domain.

Specimen 2F/F': embryonic day 11.5-12.5 (more )
Note: Stage 7 of forelimb development. Fig. 2D is a more dorsal level than Fig. 2F.
Structure Level Pattern Image Note
TS20: shoulder mesenchyme Present Regionally restricted 2F/F' Expression is concentrated in and around the distal end of the acromion blastema.
TS20: forelimb mesenchyme Present Regionally restricted 2F/F' Signal detected in the lower part of the limb bud corresponds to the anterior limit of expression in the lateral trunk.

Specimen 2H/H': embryonic day 11.5-12.5 (more )
Note: Stage 9 of forelimb development.
Structure Level Pattern Image Note
TS20: shoulder mesenchyme Weak Regionally restricted 2H/H' Expression was very weak in the proximal end of the acromion blastema.

Specimen 2K: embryonic day 11.5-12.5 (more )
Note: Stage 9 of forelimb development.
Structure Level Pattern Image Note
TS20: shoulder mesenchyme Strong Regionally restricted 2K Expression was strong in the newly condensed distal end of the acromion.

Specimen 2L/L': embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: shoulder joint primordium Present Regionally restricted 2L/L' Expression domain extends ventrally into the developing shoulder joint. Signal is distributed around and between the ends of the acromion and clavicle, but not the coracoid process.

Specimen 3A/A': embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS20: hip mesenchyme Strong Regionally restricted 3A/A' Strong expression is detected in mesoderm at the anterior end of the ileum blastema.

Specimen 3C/C': embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS21: pelvic girdle skeleton Strong Regionally restricted 3C/C' Expression is detected ventrolateral to the pubis blastema.
TS21: anterior abdominal wall musculature Weak 3C/C'

Specimen 3E/E': embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hip Present Regionally restricted 3E/E' Expression is localized around the ischium and pubis anlagen.
TS22: pubis pre-cartilage condensation Present Regionally restricted 3E/E' Expression is localized around the ischium and pubis anlagen.
TS22: anterior abdominal wall musculature Weak Regionally restricted 3E/E' Expression is detected in certain blood vessels in the lower abdominal wall.

Specimen not shown: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: ankle Present
TS22: elbow joint primordium Present
TS22: wrist Present

Specimen 4A/A': embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: knee joint primordium Present 4A/A'

Specimen 4B/B': embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: future tarsus Present 4B/B'

Specimen 4C/C': embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: hindlimb interdigital region Present Regionally restricted 4C/C' Expression is detected between the digits.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory