Gene Expression Data
Assay Details
Assay
|
Reference:
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J:20965
Timmons PM, et al., Expression and function of Pax 1 during development of the pectoral girdle. Development. 1994 Oct;120(10):2773-85
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1343385
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Gene symbol:
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Pax1
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Gene name:
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paired box 1
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Probe:
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Pax1 probe3
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Assay notes:
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Hybridization with a paired-box containing fragment (MGI:1309770) and a 3'UTR probe (MGI:28160) gave the same result.
|
|
Results
|
Specimen
not shown:
embryonic day 10.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: forelimb bud |
Present |
Regionally restricted |
|
Expression domain included mesenchyme occupying the anterior proximal region of the forelimb bud and a small outward bulge that is present at the base of the bud at this stage.
|
TS16: forelimb bud mesenchyme |
Present |
|
|
|
TS16: trunk sclerotome |
Strong |
Regionally restricted |
|
Expression levels were higher than in the forelimb.
|
Specimen
1A/A':
embryonic day 10.5
(more )
Specimen
1A/A':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
1C/C':
embryonic day 10.5
(more )
Specimen
1C/C':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: hindlimb bud mesenchyme |
Weak |
Regionally restricted |
1C/C'
|
Expression was detected in the anterior proximal mesenchyme of the hindlimb bud.
|
TS17: trunk mesenchyme |
Weak |
Regionally restricted |
1C/C'
|
Expression was detected in a longitudinal band of mesenchyme in the lateral region of the trunk. This may correspond to the Wolffian ridge, from which the limb buds originally grow out.
|
Specimen
2A:
embryonic day 11.5-12.5
(more )
Note: Stage 5 of forelimb development.
Specimen
2A:
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 11.5-12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Stage 5 of forelimb development.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: forelimb mesenchyme |
Present |
Regionally restricted |
2A
|
Expression was detected in a discrete portion of relatively uncondensed mesenchyme within the anterior proximal forelimb bud.
|
Specimen
2D:
embryonic day 11.5-12.5
(more )
Note: Stage 7 of forelimb development. Fig. 2D is a more dorsal level than Fig. 2F.
Specimen
2D:
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 11.5-12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Stage 7 of forelimb development. Fig. 2D is a more dorsal level than Fig. 2F.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: shoulder mesenchyme |
Present |
Regionally restricted |
2D
|
The blastemal scapula blade and spina region corresponds to the dorsal limit of the expression domain.
|
Specimen
2F/F':
embryonic day 11.5-12.5
(more )
Note: Stage 7 of forelimb development. Fig. 2D is a more dorsal level than Fig. 2F.
Specimen
2F/F':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 11.5-12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Stage 7 of forelimb development. Fig. 2D is a more dorsal level than Fig. 2F.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: shoulder mesenchyme |
Present |
Regionally restricted |
2F/F'
|
Expression is concentrated in and around the distal end of the acromion blastema.
|
TS20: forelimb mesenchyme |
Present |
Regionally restricted |
2F/F'
|
Signal detected in the lower part of the limb bud corresponds to the anterior limit of expression in the lateral trunk.
|
Specimen
2H/H':
embryonic day 11.5-12.5
(more )
Note: Stage 9 of forelimb development.
Specimen
2H/H':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 11.5-12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Stage 9 of forelimb development.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: shoulder mesenchyme |
Weak |
Regionally restricted |
2H/H'
|
Expression was very weak in the proximal end of the acromion blastema.
|
Specimen
2K:
embryonic day 11.5-12.5
(more )
Note: Stage 9 of forelimb development.
Specimen
2K:
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 11.5-12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Stage 9 of forelimb development.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: shoulder mesenchyme |
Strong |
Regionally restricted |
2K
|
Expression was strong in the newly condensed distal end of the acromion.
|
Specimen
2L/L':
embryonic day 14.5
(more )
Specimen
2L/L':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: shoulder joint primordium |
Present |
Regionally restricted |
2L/L'
|
Expression domain extends ventrally into the developing shoulder joint. Signal is distributed around and between the ends of the acromion and clavicle, but not the coracoid process.
|
Specimen
3A/A':
embryonic day 11.5
(more )
Specimen
3A/A':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: hip mesenchyme |
Strong |
Regionally restricted |
3A/A'
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Strong expression is detected in mesoderm at the anterior end of the ileum blastema.
|
Specimen
3C/C':
embryonic day 12.5
(more )
Specimen
3C/C':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
3E/E':
embryonic day 14.5
(more )
Specimen
3E/E':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
not shown:
embryonic day 14.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
4A/A':
embryonic day 14.5
(more )
Specimen
4A/A':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
4B/B':
embryonic day 14.5
(more )
Specimen
4B/B':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
4C/C':
embryonic day 14.5
(more )
Specimen
4C/C':
(close )
Genetic Background:
|
CBA/Ca
|
Age:
|
embryonic day 14.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
|