Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:4754
Phelps DE, et al., Aberrant expression of Pax-2 in Danforth's short tail (Sd) mice. Dev Biol. 1993 May;157(1):251-8
|
Assay type:
|
Immunohistochemistry
|
MGI Accession ID:
|
MGI:1339626
|
Gene symbol:
|
Pax2
|
Gene name:
|
paired box 2
|
|
Results
|
Specimen
not shown:
embryonic day 12.5; Etn2Sd/Etn2 +
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2+
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: spinal cord |
Present |
|
|
In rostral sections of E12 embryos, where the floor plate was present, expression in the heterozygote was the same as in wild-type embryos. Aberrant expression was evident in caudal sections of heterozygous embryos where the floor plate was absent.
|
Specimen
not shown:
embryonic day 12.5; Etn2Sd/ Etn2Sd
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: spinal cord |
Present |
Regionally restricted |
|
In rostral sections of E12 embryos, where the floor plate was present, expression in the mutant was the same as in wild-type embryos.
|
Specimen
1A:
embryonic day 12.5
(more )
Specimen
1A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: spinal cord |
Present |
Regionally restricted |
1A
|
Expression was detected in the dorsal three-fourths of the intermediate zone but was undetectable in the more ventral half of the basal plate of the lumbar spinal cord.
|
Specimen
1C:
embryonic day 12.5
(more )
Specimen
1C:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: alar columns |
Present |
Regionally restricted |
1C
|
Expression was detected in the ventral half of the alar plate in the caudal spinal cord. The expression pattern was reiterated along the entire anterior-posterior axis.
|
TS20: basal columns |
Present |
Regionally restricted |
1C
|
Expression was detected in the dorsal half but was absent in the ventral half of the basal plate in the caudal spinal cord. The expression pattern was reiterated along the entire anterior-posterior axis.
|
TS20: spinal cord sulcus limitans |
Absent |
|
1C
|
There was a clear separation at the presumptive sulcus limitans in the caudal spinal cord. The expression pattern was reiterated along the entire anterior-posterior axis.
|
TS20: spinal cord floor plate |
Absent |
|
1C
|
The expression pattern was described in the caudal spinal cord but was reiterated along the entire anterior-posterior axis.
|
TS20: spinal cord roof plate |
Absent |
|
1C
|
The expression pattern was described in the caudal spinal cord but was reiterated along the entire anterior-posterior axis.
|
Specimen
1E:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: spinal cord |
Present |
|
1E
|
Expression pattern varied depending on distance from the floor plate. Expression domains extended progressively more ventrally until a continuous band of expressing cells extended around the ventral midline.
|
Specimen
not shown:
embryonic day 13.5; Etn2Sd/Etn2 +
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2+
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: spinal cord |
Present |
|
|
In rostral sections, at levels where the floor plate was present, expression in the heterozygote was the same as in wild-type embryos.
|
Specimen
not shown:
embryonic day 13.5; Etn2Sd/ Etn2Sd
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: spinal cord |
Present |
|
|
In rostral sections, at levels where the floor plate was present, expression in the mutant was the same as in wild-type embryos.
|
Specimen
2A:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: spinal cord |
Present |
Regionally restricted |
2A
|
Rostral to the region lacking a floor plate, expression was detected in the enlarged intermediate zone. It was absent in cells that give rise to the intermediate central gray region and from presumptive motor neuroblasts in the ventrolateral basal plate.
|
TS21: alar columns |
Present |
Regionally restricted |
2A
|
Rostral to the region lacking a floor plate, expression was detected in the most dorsal alar plate, which will later form the substantia gelatinosa.
|
TS21: spinal cord floor plate |
Absent |
|
2A
|
|
TS21: spinal cord roof plate |
Absent |
|
2A
|
|
Specimen
2C:
embryonic day 13.5
(more )
Specimen
2C:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: spinal cord |
Present |
|
2C
|
Within the caudal region of wild-type E13 embryos, expression was in a pattern reminiscent of more anterior spinal cord at earlier times.
|
Specimen
2E:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: spinal cord |
Strong |
Regionally restricted |
2E
|
In mutants, in the absence of the floor plate, expression was very intense at the ventral midline.
|
Specimen
2G:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: spinal cord |
Present |
Regionally restricted |
2G
|
In mutants, in the absence of the floor plate, expression was very intense at the ventral midline. In some mutant embryos, expression was present at both the dorsal and ventral midline.
|
Specimen
3A:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
not shown:
embryonic day 11.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
3C:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: mesenchyme of metanephros |
Absent |
|
3C
|
Expression was not detected in the mesenchyme cells surrounding the posterior mesonephric duct.
|
Specimen
3D:
embryonic day 12.5
(more )
Specimen
3D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: mesenchyme of metanephros |
Present |
Regionally restricted |
3D
|
Expression was detected in the metanephros in the branched ureter and in the condensed mesenchyme surrounding the ureter.
|
TS20: ureter |
Present |
Regionally restricted |
3D
|
Expression was detected in the metanephros in the branched ureter and in the condensed mesenchyme surrounding the ureter.
|
Specimen
3E:
(close )
Genetic Background:
|
Not Specified
|
Mutant Allele(s):
|
Etn2Sd/Etn2Sd
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: ureter |
Present |
|
3E
|
Expression was detected in the ureteric bud but was absent in the surrounding cells.
|
Specimen
3F:
embryonic day 13.5
(more )
Specimen
3F:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 13.5
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
3% Paraformaldehyde
|
Embedding:
|
Cryosection
|
|